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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Flap endonuclease GEN-like protein [Medicago truncatula] gi|357507117|ref|XP_003623847.1| | 17 | ||
| – | PREDICTED: flap endonuclease GEN-like 2-like [Cicer arietinum] gi|502175270|ref|XP_004515700.1| | 21 | ||
| – | PREDICTED: exonuclease 1-like [Cicer arietinum] gi|502140539|ref|XP_004504251.1| | 24 | ||
| – | PREDICTED: flap endonuclease 1-like isoform X3 [Cicer arietinum] gi|502117445|ref|XP_004495823.1| | 19 | ||
| – | Flap endonuclease 1; TAIR: AT1G01880.1 5'-3' exonuclease family protein; Swiss-Prot: sp|Q64MA3|GENL1_ORYSJ Flap endonuclease GEN-like 1; TrEMBL-Plants: tr|A2Q3P8|A2Q3P8_MEDTR Flap endonuclease GEN-like protein; Found in the gene: LotjaGi1g1v0469700 | 17 | ||
| – | Flap endonuclease 1; TAIR: AT3G28030.1 5'-3' exonuclease family protein; Swiss-Prot: sp|Q9ATY5|UVH3_ARATH DNA repair protein UVH3; TrEMBL-Plants: tr|K7K2I9|K7K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0605700 | 26 | ||
| – | Flap endonuclease 1; TAIR: AT3G28030.1 5'-3' exonuclease family protein; Swiss-Prot: sp|Q9ATY5|UVH3_ARATH DNA repair protein UVH3; TrEMBL-Plants: tr|K7K2I9|K7K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0605700 | 24 | ||
| – | Flap endonuclease 1; TAIR: AT3G48900.2 single-stranded DNA endonuclease family protein; Swiss-Prot: sp|Q9M2Z3|GENL2_ARATH Flap endonuclease GEN-like 2; TrEMBL-Plants: tr|K7MIH1|K7MIH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144600 | 24 | ||
| – | Flap endonuclease 1; TAIR: AT1G18090.1 5'-3' exonuclease family protein; Swiss-Prot: sp|Q54ED2|EXO1_DICDI Exonuclease 1; TrEMBL-Plants: tr|V4TWE1|V4TWE1_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0199500_LC | 11 | ||
| – | Flap endonuclease 1; TAIR: AT1G18090.1 5'-3' exonuclease family protein; Swiss-Prot: sp|Q54ED2|EXO1_DICDI Exonuclease 1; TrEMBL-Plants: tr|V4TWE1|V4TWE1_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0199500_LC | 11 | ||
| – | Flap endonuclease 1; TAIR: AT1G29630.2 5'-3' exonuclease family protein; Swiss-Prot: sp|Q60GC1|EXO1_ORYSJ Exonuclease 1; TrEMBL-Plants: tr|K7L667|K7L667_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382400 | 25 | ||
| – | Flap endonuclease 1; TAIR: AT5G26680.2 5'-3' exonuclease family protein; Swiss-Prot: sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr|I3SAA1|I3SAA1_LOTJA Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800 | 27 | ||
| – | Flap endonuclease 1; TAIR: AT5G26680.3 5'-3' exonuclease family protein; Swiss-Prot: sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr|A0A072VM97|A0A072VM97_MEDTR Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800 | 26 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd09907 | CDD | 1 | 7.69 |