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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | 25 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | 33 | ||
– | PREDICTED: chromo domain-containing protein LHP1-like [Glycine max] gi|356560656|ref|XP_003548606.1| | 15 | ||
– | Ty3/gypsy retrotransposon protein [Beta vulgaris subsp]. vulgaris] gi|387965727|gb|AFK13856.1| | 14 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| | 25 | ||
– | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| | 37 | ||
– | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine max] gi|356515042|ref|XP_003526210.1| | 39 | ||
– | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| | 29 | ||
– | PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cicer arietinum] gi|502111276|ref|XP_004494007.1| | 26 | ||
– | T32E20.30 [Arabidopsis thaliana] gi|8778789|gb|AAF79797.1|AC020646_20 | 8 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356540854|ref|XP_003538899.1| | 26 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356495335|ref|XP_003516534.1| | 28 | ||
– | PREDICTED: MYST-like histone acetyltransferase 2-like isoform X2 [Cicer arietinum] gi|502127234|ref|XP_004499615.1| | 18 | ||
– | PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cicer arietinum] gi|502144378|ref|XP_004505675.1| | 22 | ||
– | PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Glycine max] gi|356538524|ref|XP_003537753.1| | 21 | ||
– | Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| | 42 | ||
– | Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 | 34 | ||
– | Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 | 34 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | 31 | ||
– | Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | 31 | ||
– | Flap endonuclease 1; TAIR: AT3G48900.2 single-stranded DNA endonuclease family protein; Swiss-Prot: sp|Q9M2Z3|GENL2_ARATH Flap endonuclease GEN-like 2; TrEMBL-Plants: tr|K7MIH1|K7MIH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144600 | 24 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800 | 36 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0315400_LC | 16 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G80740.1 chromomethylase 1; Swiss-Prot: sp|C0SQ89|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|I1J8E3|I1J8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356800 | 29 | ||
– | Histone acetyltransferase; TAIR: AT5G09740.1 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|G7IVB8|G7IVB8_MEDTR Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 | 23 | ||
– | Histone acetyltransferase; TAIR: AT5G09740.2 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|A0A176VBZ0|A0A176VBZ0_MARPO Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 | 20 | ||
– | Chromo domain-containing protein LHP1; TAIR: AT5G17690.1 like heterochromatin protein (LHP1); Swiss-Prot: sp|Q946J8|LHP1_ARATH Chromo domain-containing protein LHP1; TrEMBL-Plants: tr|A0A0R0FVG1|A0A0R0FVG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0259700 | 17 | ||
– | Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000 | 46 | ||
– | Mortality factor 4-like protein 1; TAIR: AT4G37280.1 MRG family protein; Swiss-Prot: sp|Q94C32|MRG1_ARATH Protein MRG1; TrEMBL-Plants: tr|I1K283|I1K283_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100000_LC | 17 | ||
– | Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr|A0A0B2PQY3|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500 | 32 | ||
– | Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr|A0A0B2PQY3|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500 | 32 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0213500_LC | 40 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0407700 | 35 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC | 41 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 2.70 |