Domain Predictions — View

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cd18007

Source: CDD

Description

DEXHc_ATRX-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0073900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT5G20420.1 chromatin remodeling 42; Swiss-Prot: sp\|F4K493\|CLSY2_ARATH SNF2 domain-containing protein CLASSY 2; TrEMBL-Plants: tr\|A0A0B2SWE1\|A0A0B2SWE1_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi1g1v0073900	Domains G3DSA:2.30.30.140 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF2 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	20
LotjaGi1g1v0598000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp\|F4I8S3\|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr\|V7B8F7\|V7B8F7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0598000_LC	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF5 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi1g1v0598100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA/RNA helicase protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp\|F4I8S3\|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr\|A0A1J7HMG2\|A0A1J7HMG2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0598100	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF5 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi1g1v0781900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi1g1v0781900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi2g1v0418200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp\|F4I8S3\|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr\|A0A1J7GYJ7\|A0A1J7GYJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0418200_LC	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF5 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi3g1v0061600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|A0A0B2RYY1\|A0A0B2RYY1_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi3g1v0061600	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi5g1v0177600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA repair protein-like protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0177600_LC	Domains G3DSA:3.40.50.10810 IPR006935 IPR027417 IPR038718 PF04851 PTHR45821 PTHR45821:SF1 SSF52540 cd18007 mobidb-lite	10
LotjaGi5g1v0272200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0272200	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	19
LotjaGi5g1v0309100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA repair protein-like protein; TAIR: AT2G16390.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309100	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793	18
LotjaGi6g1v0190800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0190800	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793	18
LotjaGi6g1v0190800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|A0A0B2QHR2\|A0A0B2QHR2_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi6g1v0190800	Domains G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793	18
LotjaGi6g1v0276700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp\|Q9SIW2\|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr\|I1LVC4\|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0276700	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR027417 IPR038718 PF00176 PF00271 PS51192 PS51194 PTHR45821 PTHR45821:SF1 SM00487 SM00490 SSF52540 cd18007 cd18793 mobidb-lite	20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.69