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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0013419 |
| Transcript ID | Lj0g3v0013419.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transcription factor X1-like protein [Medicago truncatula] gi|357492245|ref|XP_003616411.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 45 | 87 | 43 | 7.50E-17 | ||
| Pfam | 155 | 197 | 43 | 8.50E-14 | ||
| Pfam | 271 | 314 | 44 | 3.20E-15 | ||
| PANTHER | 364 | 451 | 88 | 8.70E-302 | – | |
| PANTHER | 364 | 451 | 88 | 8.70E-302 | – | |
| Pfam | 388 | 432 | 45 | 1.40E-14 | ||
| Pfam | 506 | 547 | 42 | 3.20E-15 | ||
| PANTHER | 549 | 1020 | 472 | 8.70E-302 | – | |
| PANTHER | 549 | 1020 | 472 | 8.70E-302 | – | |
| Pfam | 575 | 686 | 112 | 3.00E-36 | ||
| CDD | 578 | 685 | 108 | 7.53E-39 | ||
| Coils | 850 | 894 | 45 | – | – | |
| Coils | 906 | 954 | 49 | – | – | |
| Pfam | 964 | 1021 | 58 | 1.10E-18 | ||
| Coils | 1022 | 1024 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Gene silencing by RNA | Any process in which RNA molecules inactivate expression of target genes. |
Expression pattern of Lj0g3v0013419.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0013419.1, powered by CORGI.
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