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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0016119 |
| Transcript ID | Lj0g3v0016119.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | CTP synthase [Medicago truncatula] gi|357442321|ref|XP_003591438.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 23 | 8 | – | – | |
| Phobius | 24 | 133 | 110 | – | – | |
| Pfam | 64 | 117 | 54 | 4.60E-05 | ||
| Gene3D | 66 | 117 | 52 | 8.30E-07 | ||
| PANTHER | 83 | 118 | 36 | 1.90E-16 | – | |
| PANTHER | 83 | 118 | 36 | 1.90E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CTP synthase activity | Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP. | ||
| Biological process | Pyrimidine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. |
Expression pattern of Lj0g3v0016119.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0016119.1, powered by CORGI.
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