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GO:0006221

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Pyrimidine nucleotide biosynthetic process
Full defintion The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of

Relationships

The relationship of GO:0006221 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCgo_curators
ISBN

· ISBN: 0198506732

, · pages

Associated Lotus transcripts 30

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0016119.1
– CTP synthase [Medicago truncatula] gi|357442321|ref|XP_003591438.1|
GO terms
2
Lj0g3v0062759.1
– PREDICTED: uridine 5'-monophosphate synthase-like [Glycine max] gi|356548887|ref|XP_003542830.1|
GO terms
2
Lj0g3v0281729.1
– PREDICTED: CTP synthase 1-like [Cicer arietinum] gi|502154191|ref|XP_004509615.1|
GO terms
2
Lj0g3v0332949.1
– PREDICTED: CTP synthase-like isoform X1 [Cicer arietinum] gi|502182968|ref|XP_004517030.1|
GO terms
2
Lj1g3v1290360.1
– PREDICTED: uridylate kinase-like [Glycine max] gi|356512819|ref|XP_003525113.1|
GO terms
4
Lj3g3v0618170.1
– PREDICTED: UMP/CMP kinase-like isoform X2 [Cicer arietinum] gi|502155651|ref|XP_004510144.1|
GO terms
4
Lj3g3v0937760.1
– PREDICTED: CTP synthase-like isoform 1 [Glycine max] gi|356525714|ref|XP_003531468.1|
GO terms
2
Lj3g3v3751960.1
– PREDICTED: adenylate kinase-like isoform X4 [Cicer arietinum] gi|502146789|ref|XP_004506608.1|
GO terms
4
Lj3g3v3751960.3
– PREDICTED: adenylate kinase-like isoform X4 [Cicer arietinum] gi|502146789|ref|XP_004506608.1|
GO terms
4
Lj5g3v1601850.1
– PREDICTED: CTP synthase-like [Cicer arietinum] gi|502117735|ref|XP_004495920.1|
GO terms
2
Lj5g3v1601850.2
– PREDICTED: CTP synthase-like [Cicer arietinum] gi|502117735|ref|XP_004495920.1|
GO terms
2
Lj5g3v1601850.3
– PREDICTED: CTP synthase-like [Cicer arietinum] gi|502117735|ref|XP_004495920.1|
GO terms
2
LotjaGi3g1v0073100.1
– Adenylate kinase; TAIR: AT5G26667.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O04905|KCY3_ARATH UMP-CMP kinase 3; TrEMBL-Plants: tr|I3SIG7|I3SIG7_LOTJA UMP-CMP kinase; Found in the gene: LotjaGi3g1v0073100
GO terms
4
LotjaGi3g1v0111900.1
– Orotate phosphoribosyltransferase, putative; TAIR: AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); Swiss-Prot: sp|Q42586|UMPS_ARATH Uridine 5'-monophosphate synthase; TrEMBL-Plants: tr|G7IYW1|G7IYW1_MEDTR Uridine 5-monophosphate synthase-like protein; Found in the gene: LotjaGi3g1v0111900
GO terms
2
LotjaGi3g1v0111900.2
– Orotate phosphoribosyltransferase, putative; TAIR: AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); Swiss-Prot: sp|Q42586|UMPS_ARATH Uridine 5'-monophosphate synthase; TrEMBL-Plants: tr|G7IYW1|G7IYW1_MEDTR Uridine 5-monophosphate synthase-like protein; Found in the gene: LotjaGi3g1v0111900
GO terms
2
LotjaGi3g1v0130200.1
– CTP synthase; TAIR: AT3G12670.1 CTP synthase family protein; Swiss-Prot: sp|P70698|PYRG1_MOUSE CTP synthase 1; TrEMBL-Plants: tr|I1KTT7|I1KTT7_SOYBN CTP synthase; Found in the gene: LotjaGi3g1v0130200
GO terms
2
LotjaGi3g1v0130200.2
– CTP synthase; TAIR: AT3G12670.1 CTP synthase family protein; Swiss-Prot: sp|P70698|PYRG1_MOUSE CTP synthase 1; TrEMBL-Plants: tr|I1KTT7|I1KTT7_SOYBN CTP synthase; Found in the gene: LotjaGi3g1v0130200
GO terms
2
LotjaGi3g1v0300500.1
– CTP synthase; TAIR: AT3G12670.1 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|A0A072TPJ2|A0A072TPJ2_MEDTR CTP synthase; Found in the gene: LotjaGi3g1v0300500
GO terms
2
LotjaGi3g1v0320200.1
– Orotate phosphoribosyltransferase, putative; TAIR: AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); Swiss-Prot: sp|Q42586|UMPS_ARATH Uridine 5'-monophosphate synthase; TrEMBL-Plants: tr|A0A151RDY2|A0A151RDY2_CAJCA Uridine 5'-monophosphate synthase; Found in the gene: LotjaGi3g1v0320200
GO terms
2
LotjaGi3g1v0320200.2
– Orotate phosphoribosyltransferase, putative; TAIR: AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); Swiss-Prot: sp|Q42586|UMPS_ARATH Uridine 5'-monophosphate synthase; TrEMBL-Plants: tr|A0A151RDY2|A0A151RDY2_CAJCA Uridine 5'-monophosphate synthase; Found in the gene: LotjaGi3g1v0320200
GO terms
2
LotjaGi3g1v0320200.3
– Orotate phosphoribosyltransferase, putative; TAIR: AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); Swiss-Prot: sp|Q42586|UMPS_ARATH Uridine 5'-monophosphate synthase; TrEMBL-Plants: tr|A0A151RDY2|A0A151RDY2_CAJCA Uridine 5'-monophosphate synthase; Found in the gene: LotjaGi3g1v0320200
GO terms
2
LotjaGi4g1v0149400.1
– CTP synthase; TAIR: AT1G30820.1 CTP synthase family protein; Swiss-Prot: sp|P70698|PYRG1_MOUSE CTP synthase 1; TrEMBL-Plants: tr|A0A0S3R418|A0A0S3R418_PHAAN CTP synthase; Found in the gene: LotjaGi4g1v0149400
GO terms
2
LotjaGi4g1v0149400.2
– CTP synthase; TAIR: AT1G30820.1 CTP synthase family protein; Swiss-Prot: sp|P70698|PYRG1_MOUSE CTP synthase 1; TrEMBL-Plants: tr|A0A0S3R418|A0A0S3R418_PHAAN CTP synthase; Found in the gene: LotjaGi4g1v0149400
GO terms
2
LotjaGi4g1v0408200.1
– Uridylate kinase; TAIR: AT3G18680.1 Amino acid kinase family protein; Swiss-Prot: sp|Q2JS42|PYRH_SYNJA Uridylate kinase; TrEMBL-Plants: tr|A0A151TLC2|A0A151TLC2_CAJCA Uridylate kinase; Found in the gene: LotjaGi4g1v0408200
GO terms
3
LotjaGi5g1v0089900.1
– Uridylate kinase; TAIR: AT3G10030.1 aspartate/glutamate/uridylate kinase family protein; Swiss-Prot: sp|Q7VD61|PYRH_PROMA Uridylate kinase; TrEMBL-Plants: tr|V7BJN9|V7BJN9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0089900
GO terms
4
LotjaGi5g1v0247000.1
– CTP synthase; TAIR: AT4G02120.1 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|I1JBI0|I1JBI0_SOYBN CTP synthase; Found in the gene: LotjaGi5g1v0247000
GO terms
2
LotjaGi5g1v0247000.2
– CTP synthase; TAIR: AT4G02120.1 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|I1JBI0|I1JBI0_SOYBN CTP synthase; Found in the gene: LotjaGi5g1v0247000
GO terms
2
LotjaGi5g1v0247000.3
– CTP synthase; TAIR: AT4G02120.3 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|A0A151U4J8|A0A151U4J8_CAJCA CTP synthase; Found in the gene: LotjaGi5g1v0247000
GO terms
2
LotjaGi5g1v0247000.4
– CTP synthase; TAIR: AT4G02120.1 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|I1JBI0|I1JBI0_SOYBN CTP synthase; Found in the gene: LotjaGi5g1v0247000
GO terms
2
LotjaGi5g1v0247000.5
– CTP synthase; TAIR: AT4G02120.1 CTP synthase family protein; Swiss-Prot: sp|Q54V77|PYRG_DICDI CTP synthase; TrEMBL-Plants: tr|I1JBI0|I1JBI0_SOYBN CTP synthase; Found in the gene: LotjaGi5g1v0247000
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006221
Biological process Pyrimidine nucleotide biosynthetic process 1 3.33