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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0062309 |
| Transcript ID | Lj0g3v0062309.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|18394746|ref|NP_564086.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 59 | 227 | 169 | 4.70E-151 | – | |
| PANTHER | 59 | 227 | 169 | 4.70E-151 | – | |
| Gene3D | 206 | 228 | 23 | 2.80E-18 | ||
| MobiDBLite | 231 | 398 | 168 | – | – | |
| SMART | 238 | 250 | 13 | 150 | ||
| PRINTS | 258 | 268 | 11 | 9.50E-09 | ||
| SMART | 258 | 270 | 13 | 0.97 | ||
| SMART | 300 | 312 | 13 | 150 | ||
| PRINTS | 318 | 329 | 12 | 9.50E-09 | ||
| SMART | 320 | 332 | 13 | 0.97 | ||
| SMART | 362 | 374 | 13 | 150 | ||
| PRINTS | 380 | 390 | 11 | 9.50E-09 | ||
| SMART | 382 | 394 | 13 | 6.2 | ||
| MobiDBLite | 421 | 469 | 49 | – | – | |
| SMART | 438 | 449 | 12 | 130 | ||
| SMART | 457 | 469 | 13 | 44 | ||
| PANTHER | 575 | 921 | 347 | 4.70E-151 | – | |
| PANTHER | 575 | 921 | 347 | 4.70E-151 | – | |
| SMART | 586 | 636 | 51 | 69 | ||
| Gene3D | 590 | 870 | 281 | 2.80E-18 | ||
| SUPERFAMILY | 591 | 865 | 275 | 2.26E-21 | ||
| SMART | 653 | 705 | 53 | 20 | ||
| SMART | 716 | 760 | 45 | 0.02 | ||
| SMART | 764 | 803 | 40 | 300 | ||
| SMART | 824 | 861 | 38 | 63 | ||
| PANTHER | 953 | 1050 | 98 | 4.70E-151 | – | |
| PANTHER | 953 | 1050 | 98 | 4.70E-151 | – | |
| MobiDBLite | 958 | 977 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0062309.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0062309.1, powered by CORGI.
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