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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 84 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.861s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | AT DNA binding protein (Thy28) [Aspergillus niger CBS 513].88] gi|145257371|ref|XP_001401706.1| | chr0 | 18129860 | 18130757 | - | |||
n.a. | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|18394746|ref|NP_564086.1| | chr0 | 20888206 | 20904997 | - | |||
n.a. | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|18394746|ref|NP_564086.1| | chr0 | 20900418 | 20901766 | - | |||
n.a. | family 2 glycosyl transferase [Myxococcus stipitatus DSM 14675] gi|442322689|ref|YP_007362710.1| | chr0 | 27682602 | 27683896 | - | |||
n.a. | origin recognition complex subunit Orc4 [Schizosaccharomyces pombe 972h]-] gi|19112617|ref|NP_595825.1| | chr0 | 38883609 | 38885196 | - | |||
n.a. | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508709078|gb|EOY00975.1| | chr0 | 38883609 | 38887246 | - | |||
n.a. | PHD finger family protein [Arabidopsis lyrata subsp]. lyrata] gi|297801176|ref|XP_002868472.1| | chr0 | 42586261 | 42594667 | - | |||
n.a. | HMG-Y-related protein A [Medicago truncatula] gi|357460891|ref|XP_003600727.1| | chr0 | 110690915 | 110692219 | - | |||
n.a. | PREDICTED: zinc finger protein 436-like [Cavia porcellus] gi|348570796|ref|XP_003471183.1| | chr0 | 122410972 | 122411653 | - | |||
n.a. | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|18394746|ref|NP_564086.1| | chr0 | 134881318 | 134890456 | + | |||
n.a. | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|18394746|ref|NP_564086.1| | chr0 | 134881318 | 134890456 | + | |||
n.a. | HMGA2/WIF1 fusion protein [Homo sapiens] gi|125662765|gb|ABN50327.1| | chr0 | 138550342 | 138551690 | - | |||
n.a. | AT hook motif DNA-binding family protein isoform 1 [Theobroma cacao] gi|508704093|gb|EOX95989.1| | chr0 | 157525301 | 157529536 | + | |||
n.a. | Os07g0180800 [Oryza sativa Japonica Group] gi|297725433|ref|NP_001175080.1| | chr0 | 162241895 | 162243618 | + | |||
n.a. | AT-hook protein [Medicago truncatula] gi|357476667|ref|XP_003608619.1| | chr0 | 166772577 | 166776520 | - | |||
n.a. | nitrite reductase [uncultured marine bacterium] gi|363586052|gb|AEW29026.1| | chr0 | 184622047 | 184623288 | - | |||
n.a. | TashAT2 [Theileria annulata] gi|289597673|gb|ADD12272.1| | chr0 | 186906211 | 186907849 | - | |||
n.a. | PREDICTED: HMG-Y-related protein A-like [Glycine max] gi|356539824|ref|XP_003538393.1| | chr0 | 190201800 | 190202484 | + | |||
n.a. | related to DNA ligase (ATP) [Claviceps purpurea 20].1] gi|399166869|emb|CCE32226.1| | chr1 | 7952233 | 7952617 | + | |||
n.a. | ENBP1 [Medicago truncatula] gi|3492803|emb|CAA05489.1| | chr1 | 9605996 | 9635902 | + | |||
n.a. | Lysine-specific demethylase 3B [Medicago truncatula] gi|357436481|ref|XP_003588516.1| | chr1 | 9606005 | 9608750 | + | |||
n.a. | KLTH0F07568p [Lachancea thermotolerans] gi|255716500|ref|XP_002554531.1| | chr1 | 30850485 | 30851315 | + | |||
n.a. | AT hook motif DNA-binding family protein isoform 1 [Theobroma cacao] gi|508704093|gb|EOX95989.1| | chr1 | 30878635 | 30883387 | - | |||
n.a. | AT hook motif DNA-binding family protein isoform 1 [Theobroma cacao] gi|508704093|gb|EOX95989.1| | chr1 | 30878999 | 30883387 | - | |||
n.a. | AT-hook protein 1 [Zea mays] gi|226532898|ref|NP_001149717.1| | chr1 | 39211773 | 39215090 | - | |||
n.a. | HMG I/Y like protein [Glycine max] gi|351723585|ref|NP_001236260.1| | chr2 | 10862247 | 10864542 | - | |||
n.a. | AT-hook protein [Medicago truncatula] gi|357476667|ref|XP_003608619.1| | chr2 | 29232473 | 29236250 | - | |||
n.a. | high mobility group protein [Canavalia gladiata] gi|1181589|dbj|BAA11766.1| | chr2 | 35272421 | 35273630 | - | |||
n.a. | PttB [Medicago truncatula] gi|357486205|ref|XP_003613390.1| | chr3 | 7886811 | 7890695 | - | |||
n.a. | AT hook motif DNA-binding family protein isoform 1 [Theobroma cacao] gi|508704093|gb|EOX95989.1| | chr3 | 15196922 | 15200189 | + | |||
n.a. | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Maylandia zebra] gi|499027288|ref|XP_004564380.1| | chr4 | 21990064 | 21990609 | + | |||
n.a. | ATP synthase subunit-like protein [Medicago truncatula] gi|357519249|ref|XP_003629913.1| | chr4 | 36001097 | 36007317 | - | |||
n.a. | ATP synthase subunit-like protein [Medicago truncatula] gi|357519249|ref|XP_003629913.1| | chr4 | 36001097 | 36007317 | - | |||
n.a. | DNA-binding protein PD1 [Pisum sativum] gi|2213536|emb|CAA67290.1| | chr4 | 39102707 | 39106087 | - | |||
n.a. | HMG I/Y like protein [Glycine max] gi|351723585|ref|NP_001236260.1| | chr4 | 42047142 | 42049604 | + | |||
n.a. | DNA-binding protein [Medicago truncatula] gi|357504087|ref|XP_003622332.1| | chr5 | 19736808 | 19743516 | + | |||
n.a. | HMGI/Y [Pisum sativum] gi|899367|emb|CAA61747.1| | chr6 | 3969164 | 3970540 | - | |||
n.a. | PREDICTED: high mobility group protein HMG-I/HMG-Y isoform X2 [Ochotona princeps] gi|504157635|ref|XP_004590339.1| | chr6 | 7155859 | 7156830 | - | |||
n.a. | Transducin/WD40 repeat protein; TAIR: AT1G19485.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P79987|HIRA_CHICK Protein HIRA; TrEMBL-Plants: tr|A0A072VKV4|A0A072VKV4_MEDTR Transducin/WD40 repeat protein; Found in the gene: LotjaGi1g1v0007100_LC | LjG1.1_chr1 | 1012673 | 1014044 | - | |||
n.a. | HMG-Y-related protein A; TAIR: AT1G14900.1 high mobility group A; Swiss-Prot: sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A; TrEMBL-Plants: tr|A0A1J7HLR9|A0A1J7HLR9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0092300 | LjG1.1_chr1 | 13568955 | 13570373 | - | |||
n.a. | Amyloid beta A4 precursor protein-binding family B member 1-interacting protein; TAIR: AT5G39820.1 NAC domain containing protein 94; Swiss-Prot: sp|Q6ZFZ4|DEK1_ORYSJ Calpain-type cysteine protease ADL1; TrEMBL-Plants: tr|C0JP24|C0JP24_LOTJA Putative basic helix-loop-helix protein BHLH6; Found in the gene: LotjaGi1g1v0161700_LC | LjG1.1_chr1 | 30418279 | 30419572 | - | |||
n.a. | Transcription factor jumonji domain-containing protein; TAIR: AT4G00990.1 Transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|Q9SSE9|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr|K7M755|K7M755_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0224300 | LjG1.1_chr1 | 50808555 | 50839615 | - | |||
n.a. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT2G16950.1 transportin 1; Swiss-Prot: sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation; TrEMBL-Plants: tr|C0JP24|C0JP24_LOTJA Putative basic helix-loop-helix protein BHLH6; Found in the gene: LotjaGi1g1v0311000_LC | LjG1.1_chr1 | 75443351 | 75445084 | + | |||
n.a. | AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|V7AUS6|V7AUS6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0569400 | LjG1.1_chr1 | 110231950 | 110235440 | - | |||
n.a. | High mobility group protein HMGI-C; TAIR: AT5G46200.1 carboxyl-terminal proteinase-like protein (DUF239); Swiss-Prot: sp|Q95QK3|JMJ31_CAEEL Lysine-specific demethylase jmjd-3.1; TrEMBL-Plants: tr|F6HE43|F6HE43_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0138100_LC | LjG1.1_chr2 | 50404611 | 50407429 | + | |||
n.a. | Histone H1; TAIR: AT1G48620.1 high mobility group A5; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|V7CTB3|V7CTB3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0198500 | LjG1.1_chr2 | 63348952 | 63355051 | - | |||
n.a. | AT hook motif DNA-binding family protein; TAIR: AT4G17950.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q940I0|AHL13_ARATH AT-hook motif nuclear-localized protein 13; TrEMBL-Plants: tr|A0A0L9UQM7|A0A0L9UQM7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415000 | LjG1.1_chr2 | 91271404 | 91275311 | - | |||
n.a. | Imidazole glycerol phosphate synthase subunit HisF; TAIR: AT1G62820.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9XEC1|Y4443_ARATH Probable transposase-like protein At4g04430; TrEMBL-Plants: tr|A0A072TE97|A0A072TE97_MEDTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0088400_LC | LjG1.1_chr3 | 9972018 | 9976463 | + | |||
n.a. | RNA-binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q2H0U6|EIF3G_CHAGB Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A087SFR6|A0A087SFR6_AUXPR Eukaryotic translation initiation factor 3 subunit G; Found in the gene: LotjaGi3g1v0105100_LC | LjG1.1_chr3 | 13054540 | 13056414 | + | |||
n.a. | AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|A0A0S3SCI8|A0A0S3SCI8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0123600_LC | LjG1.1_chr3 | 15130671 | 15133335 | + |