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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0072829 |
| Transcript ID | Lj0g3v0072829.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Subtilisin-like protease [Medicago truncatula] gi|357462409|ref|XP_003601486.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 767 | 767 | 0 | ||
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 767 | 767 | 0 | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 26 | 5 | – | – | |
| Gene3D | 26 | 104 | 79 | 4.00E-04 | ||
| Phobius | 27 | 769 | 743 | – | – | |
| Pfam | 30 | 115 | 86 | 4.60E-13 | ||
| CDD | 113 | 593 | 481 | 1.55E-130 | – | |
| SUPERFAMILY | 114 | 390 | 277 | 5.11E-75 | ||
| Gene3D | 133 | 361 | 229 | 2.60E-74 | ||
| PRINTS | 143 | 162 | 20 | 2.30E-11 | ||
| Pfam | 143 | 618 | 476 | 9.50E-45 | ||
| MobiDBLite | 212 | 231 | 20 | – | – | |
| PRINTS | 218 | 231 | 14 | 2.30E-11 | ||
| CDD | 358 | 488 | 131 | 1.21E-38 | – | |
| Pfam | 400 | 472 | 73 | 6.10E-11 | ||
| SUPERFAMILY | 401 | 481 | 81 | 3.14E-07 | – | |
| Gene3D | 408 | 470 | 63 | 5.10E-08 | – | |
| Gene3D | 499 | 626 | 128 | 2.60E-74 | ||
| SUPERFAMILY | 503 | 630 | 128 | 5.11E-75 | ||
| PRINTS | 556 | 572 | 17 | 2.30E-11 | ||
| ProSitePatterns | 557 | 567 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj0g3v0072829.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0072829.1, powered by CORGI.
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