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Lj0g3v0097809.1

Overview

Field Value
Gene ID Lj0g3v0097809
Transcript ID Lj0g3v0097809.1
Lotus japonicus genome version MG20 v3.0
Description branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11825:SF54
1 321 321 2.40E-238 –
PIRSF
PIRSF006468
1 323 323 2.40E-109
IPR005786
PANTHER
PTHR11825
1 321 321 2.40E-238
IPR001544
Gene3D
G3DSA:3.30.470.10
2 147 146 1.10E-56 –
SUPERFAMILY
SSF56752
3 319 317 1.83E-95
IPR001544
TIGRFAM
TIGR01123
20 322 303 3.50E-94
IPR005786
CDD
cd01557
29 310 282 3.74E-120
IPR033939
Pfam
PF01063
42 280 239 9.80E-40
IPR001544
Gene3D
G3DSA:3.20.10.10
148 308 161 1.30E-58 –
ProSitePatterns
PS00770
206 235 30 –
IPR018300

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004084
Molecular function Branched-chain-amino-acid transaminase activity Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.
Subterm of
GO:0009081
Biological process Branched-chain amino acid metabolic process The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj0g3v0097809.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0097809.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.