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Field | Value |
---|---|
Gene ID | Lj0g3v0101489 |
Transcript ID | Lj0g3v0101489.1 |
Related isoforms 1 | |
Lotus japonicus genome version | MG20 v3.0 |
Description | SNF2 super family [Bathycoccus prasinos] gi|412991118|emb|CCO15963.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 58 | 58 | 4.70E-14 | – | |
PANTHER | 1 | 58 | 58 | 4.70E-14 | ||
SUPERFAMILY | 2 | 76 | 75 | 2.16E-08 | ||
Gene3D | 4 | 65 | 62 | 7.70E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | NURF complex | An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters. | ||
Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
Biological process | ATP-dependent chromatin remodeling | Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors. |
Expression pattern of Lj0g3v0101489.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0101489.1, powered by CORGI.
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