Domain Predictions — View

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IPR029915

Source: InterPro

Description

IPR029915 is a .

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016589 View details of GO:0016589 AmiGO InterPro QuickGO	Cellular component	NURF complex	An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters.	Subterm of GO:0031010
GO:0016887 View details of GO:0016887 AmiGO InterPro QuickGO	Molecular function	ATPase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.	Subterm of GO:0017111
GO:0043044 View details of GO:0043044 AmiGO InterPro QuickGO	Biological process	ATP-dependent chromatin remodeling	Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors.	Subterm of GO:0006338

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0044979.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 super family [Bathycoccus prasinos] gi\|412991118\|emb\|CCO15963.1\|	Domains G3DSA:3.40.50.300 IPR027417 IPR029915 PTHR10799 PTHR10799:SF691 SSF52540	6
Lj0g3v0044979.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 super family [Bathycoccus prasinos] gi\|412991118\|emb\|CCO15963.1\|	Domains G3DSA:3.40.50.300 IPR027417 IPR029915 PTHR10799 PTHR10799:SF691 SSF52540	6
Lj0g3v0101489.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SNF2 super family [Bathycoccus prasinos] gi\|412991118\|emb\|CCO15963.1\|	Domains G3DSA:3.40.50.300 IPR027417 IPR029915 PTHR10799 PTHR10799:SF691 SSF52540	6
Lj4g3v2371620.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling complex subunit [Medicago truncatula] gi\|357447407\|ref\|XP_003593979.1\|	Domains Coil G3DSA:1.10.10.60 G3DSA:3.40.50.300 IPR000330 IPR001005 IPR001650 IPR009057 IPR014001 IPR015194 IPR015195 IPR017884 IPR027417 IPR029915 PF00176 PF00271 PF09110 PF09111 PS51192 PS51194 PS51293 PTHR10799 PTHR10799:SF691 SM00487 SM00490 SM00717 SSF101224 SSF46689 SSF52540 cd00046 cd00079 cd00167 mobidb-lite	32
Lj6g3v1919360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling complex subunit [Medicago truncatula] gi\|357447407\|ref\|XP_003593979.1\|	Domains Coil G3DSA:1.10.10.60 G3DSA:3.40.50.300 IPR000330 IPR001005 IPR001650 IPR009057 IPR014001 IPR015194 IPR015195 IPR017884 IPR020838 IPR027417 IPR029915 PF00176 PF00271 PF09110 PF09111 PF13892 PS51192 PS51194 PS51293 PTHR10799 PTHR10799:SF691 SM00487 SM00490 SM00717 SSF101224 SSF46689 SSF52540 cd00046 cd00079 cd00167 mobidb-lite	34

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00