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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0134189 |
| Transcript ID | Lj0g3v0134189.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Small glutamine-rich tetratricopeptide repeat-containing protein [Medicago truncatula] gi|357489549|ref|XP_003615062.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 38 | 209 | 172 | – | – | |
| PANTHER | 212 | 702 | 491 | 0 | – | |
| PANTHER | 212 | 702 | 491 | 0 | – | |
| Gene3D | 231 | 328 | 98 | 5.40E-27 | ||
| SUPERFAMILY | 236 | 329 | 94 | 4.88E-31 | ||
| SMART | 237 | 270 | 34 | 6.50E-04 | ||
| ProSiteProfiles | 237 | 270 | 34 | 9.853 | ||
| ProSiteProfiles | 237 | 571 | 335 | 28.36 | ||
| Pfam | 244 | 276 | 33 | 2.70E-08 | ||
| ProSiteProfiles | 271 | 304 | 34 | 6.697 | ||
| SMART | 271 | 304 | 34 | 0.19 | ||
| SMART | 305 | 338 | 34 | 190 | ||
| SUPERFAMILY | 380 | 459 | 80 | 4.88E-31 | ||
| Gene3D | 380 | 469 | 90 | 1.40E-06 | ||
| SMART | 424 | 457 | 34 | 13 | ||
| ProSiteProfiles | 424 | 457 | 34 | 9.116 | ||
| Pfam | 431 | 504 | 74 | 3.10E-06 | – | |
| ProSiteProfiles | 470 | 503 | 34 | 7.523 | ||
| SMART | 470 | 503 | 34 | 27 | ||
| Gene3D | 474 | 587 | 114 | 5.60E-29 | ||
| SUPERFAMILY | 475 | 586 | 112 | 2.36E-27 | ||
| SMART | 504 | 537 | 34 | 5.10E-05 | ||
| ProSiteProfiles | 504 | 537 | 34 | 6.579 | ||
| Pfam | 506 | 535 | 30 | 1.30E-06 | ||
| SMART | 538 | 571 | 34 | 17 | ||
| ProSiteProfiles | 538 | 571 | 34 | 6.49 | ||
| SUPERFAMILY | 589 | 692 | 104 | 5.30E-12 | ||
| Gene3D | 606 | 698 | 93 | 2.40E-12 | ||
| CDD | 611 | 694 | 84 | 9.55E-15 | – | |
| Pfam | 632 | 693 | 62 | 6.90E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of Lj0g3v0134189.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0134189.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.