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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0161609 |
| Transcript ID | Lj0g3v0161609.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At3g48810-like [Cicer arietinum] gi|502123624|ref|XP_004498194.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 74 | 108 | 35 | 7.717 | ||
| Pfam | 97 | 155 | 59 | 4.90E-05 | ||
| PANTHER | 109 | 658 | 550 | 3.40E-294 | – | |
| PANTHER | 109 | 658 | 550 | 3.40E-294 | – | |
| ProSiteProfiles | 109 | 143 | 35 | 9.942 | ||
| TIGRFAM | 115 | 145 | 31 | 7.60E-05 | ||
| Gene3D | 118 | 161 | 44 | 8.90E-06 | ||
| ProSiteProfiles | 144 | 178 | 35 | 7.815 | ||
| ProSiteProfiles | 179 | 213 | 35 | 14.59 | ||
| Pfam | 179 | 227 | 49 | 6.40E-18 | ||
| TIGRFAM | 181 | 214 | 34 | 3.00E-11 | ||
| ProSiteProfiles | 214 | 237 | 24 | 6.445 | ||
| TIGRFAM | 216 | 237 | 22 | 0.0017 | ||
| ProSiteProfiles | 244 | 278 | 35 | 11.312 | ||
| Pfam | 245 | 290 | 46 | 3.50E-16 | ||
| TIGRFAM | 247 | 280 | 34 | 2.10E-09 | ||
| ProSiteProfiles | 279 | 313 | 35 | 11.433 | ||
| TIGRFAM | 281 | 315 | 35 | 9.70E-08 | ||
| Gene3D | 282 | 309 | 28 | 8.90E-06 | ||
| ProSiteProfiles | 314 | 348 | 35 | 10.709 | ||
| TIGRFAM | 316 | 350 | 35 | 5.70E-06 | ||
| Pfam | 317 | 346 | 30 | 0.0022 | ||
| Gene3D | 347 | 447 | 101 | 8.90E-06 | ||
| Pfam | 348 | 397 | 50 | 3.50E-18 | ||
| ProSiteProfiles | 349 | 383 | 35 | 12.134 | ||
| TIGRFAM | 351 | 385 | 35 | 3.40E-10 | ||
| ProSiteProfiles | 384 | 418 | 35 | 12.003 | ||
| TIGRFAM | 387 | 420 | 34 | 6.70E-10 | ||
| Pfam | 418 | 466 | 49 | 2.50E-15 | ||
| ProSiteProfiles | 419 | 453 | 35 | 11.696 | ||
| TIGRFAM | 421 | 455 | 35 | 7.90E-07 | ||
| ProSiteProfiles | 454 | 488 | 35 | 11.005 | ||
| TIGRFAM | 456 | 490 | 35 | 2.10E-08 | ||
| Pfam | 488 | 535 | 48 | 1.10E-11 | ||
| ProSiteProfiles | 489 | 523 | 35 | 10.063 | ||
| TIGRFAM | 492 | 524 | 33 | 1.80E-05 | ||
| ProSiteProfiles | 524 | 558 | 35 | 11.279 | ||
| TIGRFAM | 526 | 560 | 35 | 7.40E-06 | ||
| Pfam | 554 | 584 | 31 | 4.90E-08 | ||
| Gene3D | 557 | 581 | 25 | 8.90E-06 | ||
| ProSiteProfiles | 559 | 594 | 36 | 7.914 | ||
| ProSiteProfiles | 595 | 629 | 35 | 7.717 | ||
| ProSiteProfiles | 630 | 661 | 32 | 6.237 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0161609.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0161609.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.