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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0183609 |
| Transcript ID | Lj0g3v0183609.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: potassium channel KAT1-like [Glycine max] gi|356523521|ref|XP_003530386.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 55 | 55 | – | – | |
| PANTHER | 21 | 540 | 520 | 0 | – | |
| PANTHER | 21 | 540 | 520 | 0 | – | |
| SUPERFAMILY | 46 | 291 | 246 | 1.83E-43 | – | |
| Gene3D | 52 | 291 | 240 | 1.30E-44 | – | |
| Pfam | 52 | 298 | 247 | 2.00E-33 | ||
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 56 | 76 | 21 | – | – | |
| PRINTS | 64 | 71 | 8 | 1.10E-08 | ||
| Phobius | 77 | 87 | 11 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| PRINTS | 87 | 97 | 11 | 1.10E-08 | ||
| Phobius | 88 | 106 | 19 | – | – | |
| PRINTS | 98 | 107 | 10 | 1.10E-08 | ||
| Phobius | 107 | 125 | 19 | – | – | |
| Phobius | 126 | 147 | 22 | – | – | |
| Phobius | 148 | 192 | 45 | – | – | |
| Phobius | 193 | 212 | 20 | – | – | |
| TMHMM | 193 | 212 | 20 | – | – | |
| Phobius | 213 | 238 | 26 | – | – | |
| TMHMM | 233 | 255 | 23 | – | – | |
| Phobius | 239 | 258 | 20 | – | – | |
| PRINTS | 239 | 256 | 18 | 1.10E-08 | ||
| Phobius | 259 | 269 | 11 | – | – | |
| PRINTS | 265 | 276 | 12 | 1.10E-08 | ||
| Phobius | 270 | 294 | 25 | – | – | |
| TMHMM | 270 | 292 | 23 | – | – | |
| PRINTS | 283 | 292 | 10 | 1.10E-08 | ||
| Phobius | 295 | 735 | 441 | – | – | |
| SUPERFAMILY | 296 | 486 | 191 | 7.33E-41 | ||
| TMHMM | 353 | 375 | 23 | – | – | |
| Gene3D | 357 | 478 | 122 | 4.10E-22 | ||
| CDD | 369 | 476 | 108 | 2.07E-24 | – | |
| ProSiteProfiles | 369 | 488 | 120 | 23.368 | ||
| SMART | 369 | 486 | 118 | 1.20E-23 | ||
| Pfam | 389 | 473 | 85 | 2.40E-13 | ||
| PANTHER | 558 | 660 | 103 | 0 | – | |
| PANTHER | 558 | 660 | 103 | 0 | – | |
| Pfam | 656 | 725 | 70 | 4.70E-22 | ||
| ProSiteProfiles | 657 | 735 | 79 | 27.525 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ion channel activity | Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size). | ||
| Molecular function | Voltage-gated potassium channel activity | Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0183609.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0183609.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.