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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0199579 |
| Transcript ID | Lj0g3v0199579.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-c-like [Cicer arietinum] gi|502126612|ref|XP_004499372.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 353 | 353 | 0 | – | |
| PANTHER | 1 | 353 | 353 | 0 | – | |
| Phobius | 1 | 41 | 41 | – | – | |
| CDD | 18 | 540 | 523 | 0 | – | |
| PRINTS | 23 | 31 | 9 | 5.60E-23 | ||
| SUPERFAMILY | 27 | 354 | 328 | 1.12E-102 | ||
| Gene3D | 35 | 354 | 320 | 1.60E-123 | ||
| Phobius | 42 | 66 | 25 | – | – | |
| TMHMM | 45 | 67 | 23 | – | – | |
| Phobius | 67 | 94 | 28 | – | – | |
| TMHMM | 94 | 116 | 23 | – | – | |
| Phobius | 95 | 120 | 26 | – | – | |
| Pfam | 105 | 521 | 417 | 5.60E-93 | ||
| PRINTS | 118 | 135 | 18 | 2.50E-62 | ||
| Phobius | 121 | 139 | 19 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 140 | 163 | 24 | – | – | |
| PRINTS | 149 | 168 | 20 | 2.50E-62 | ||
| Phobius | 164 | 206 | 43 | – | – | |
| TMHMM | 207 | 229 | 23 | – | – | |
| Phobius | 207 | 230 | 24 | – | – | |
| PRINTS | 213 | 232 | 20 | 2.50E-62 | ||
| Phobius | 231 | 241 | 11 | – | – | |
| PRINTS | 234 | 242 | 9 | 5.60E-23 | ||
| TMHMM | 241 | 263 | 23 | – | – | |
| Phobius | 242 | 261 | 20 | – | – | |
| PRINTS | 248 | 258 | 11 | 5.60E-23 | ||
| Phobius | 262 | 293 | 32 | – | – | |
| PRINTS | 266 | 273 | 8 | 5.60E-23 | ||
| TMHMM | 289 | 311 | 23 | – | – | |
| Phobius | 294 | 314 | 21 | – | – | |
| Phobius | 315 | 333 | 19 | – | – | |
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 334 | 354 | 21 | – | – | |
| Phobius | 355 | 419 | 65 | – | – | |
| PANTHER | 383 | 732 | 350 | 0 | – | |
| PANTHER | 383 | 732 | 350 | 0 | – | |
| PRINTS | 391 | 407 | 17 | 5.60E-23 | ||
| SUPERFAMILY | 396 | 542 | 147 | 1.12E-102 | ||
| Gene3D | 396 | 545 | 150 | 1.60E-123 | ||
| Phobius | 420 | 449 | 30 | – | – | |
| TMHMM | 422 | 444 | 23 | – | – | |
| PRINTS | 439 | 459 | 21 | 2.50E-62 | ||
| Phobius | 450 | 460 | 11 | – | – | |
| TMHMM | 457 | 479 | 23 | – | – | |
| Phobius | 461 | 482 | 22 | – | – | |
| PRINTS | 471 | 487 | 17 | 2.50E-62 | ||
| Phobius | 483 | 493 | 11 | – | – | |
| PRINTS | 489 | 508 | 20 | 2.50E-62 | ||
| Phobius | 494 | 515 | 22 | – | – | |
| TMHMM | 494 | 516 | 23 | – | – | |
| Phobius | 516 | 732 | 217 | – | – | |
| PRINTS | 527 | 541 | 15 | 2.50E-62 | ||
| SUPERFAMILY | 544 | 718 | 175 | 2.07E-23 | – | |
| Gene3D | 549 | 618 | 70 | 2.20E-11 | – | |
| ProSiteProfiles | 556 | 618 | 63 | 6.979 | ||
| CDD | 563 | 718 | 156 | 4.53E-20 | – | |
| Gene3D | 656 | 718 | 63 | 2.20E-11 | – | |
| ProSiteProfiles | 668 | 731 | 64 | 9.529 | ||
| Pfam | 669 | 717 | 49 | 0.001 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0199579.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0199579.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.