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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0228679 |
| Transcript ID | Lj0g3v0228679.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356558433|ref|XP_003547511.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 424 | 424 | – | – | |
| PANTHER | 13 | 825 | 813 | 0 | ||
| PANTHER | 13 | 825 | 813 | 0 | – | |
| PIRSF | 15 | 825 | 811 | 1.50E-278 | ||
| Pfam | 43 | 817 | 775 | 2.20E-286 | ||
| Coils | 106 | 133 | 28 | – | – | |
| Phobius | 425 | 453 | 29 | – | – | |
| TMHMM | 431 | 453 | 23 | – | – | |
| Phobius | 454 | 473 | 20 | – | – | |
| TMHMM | 470 | 492 | 23 | – | – | |
| Phobius | 474 | 491 | 18 | – | – | |
| Phobius | 492 | 553 | 62 | – | – | |
| Phobius | 554 | 572 | 19 | – | – | |
| TMHMM | 556 | 578 | 23 | – | – | |
| Phobius | 573 | 591 | 19 | – | – | |
| TMHMM | 591 | 613 | 23 | – | – | |
| Phobius | 592 | 609 | 18 | – | – | |
| Phobius | 610 | 643 | 34 | – | – | |
| Phobius | 644 | 661 | 18 | – | – | |
| TMHMM | 645 | 667 | 23 | – | – | |
| Phobius | 662 | 761 | 100 | – | – | |
| TMHMM | 761 | 783 | 23 | – | – | |
| Phobius | 762 | 783 | 22 | – | – | |
| Phobius | 784 | 825 | 42 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase, V0 domain | The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane. | ||
| Molecular function | Proton transmembrane transporter activity | Enables the transfer of a proton from one side of a membrane to the other. | ||
| Cellular component | Proton-transporting V-type ATPase, V0 domain | A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of Lj0g3v0228679.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0228679.1, powered by CORGI.
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