Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR026028

Source: InterPro

Description

IPR026028 is a ATPase, V0 complex, subunit 116kDa, eukaryotic.

<p>Transmembrane ATPases are membrane-bound enzyme complexes/ion transporters that use ATP hydrolysis to drive the transport of protons across a membrane. Some transmembrane ATPases also work in reverse, harnessing the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP.</p> <p>This entry represent eukaryotic V-ATPase 116kDa subunit (also known as subunit a). V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex [[cite:PUB00063566]]. V-ATPase 116kDa subunit is part of the integral membrane V0 complex of vacuolar ATPase and is essential for assembly and catalytic activity [[cite:PUB00059278], [cite:PUB00099348]]. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000220
Cellular component Vacuolar proton-transporting V-type ATPase, V0 domain The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj0g3v0228679.1
– PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356558433|ref|XP_003547511.1|
Domains
11
Lj3g3v3087270.2
– PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356542569|ref|XP_003539739.1|
Domains
11
LotjaGi1g1v0424500.1
– V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|A0A151RQM9|A0A151RQM9_CAJCA V-type proton ATPase subunit a; Found in the gene: LotjaGi1g1v0424500
Domains
11
LotjaGi2g1v0364600.1
– V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|I1LR08|I1LR08_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi2g1v0364600
Domains
11
LotjaGi3g1v0273900.1
– V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|K7M9K9|K7M9K9_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900
Domains
11
LotjaGi3g1v0273900.2
– V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0S3SGJ3|A0A0S3SGJ3_PHAAN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900
Domains
11
LotjaGi3g1v0273900.3
– V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0S3SGJ3|A0A0S3SGJ3_PHAAN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900
Domains
11
LotjaGi3g1v0512800.1
– V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|B0BL94|B0BL94_LOTJA V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0512800
Domains
11
LotjaGi3g1v0512800.2
– V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|B0BL94|B0BL94_LOTJA V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0512800
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 11.11