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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0263569 |
| Transcript ID | Lj0g3v0263569.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: expansin-A20-like [Cicer arietinum] gi|502168738|ref|XP_004514456.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 59 | 199 | 141 | 3.00E-22 | ||
| SUPERFAMILY | 61 | 205 | 145 | 3.58E-20 | – | |
| Pfam | 116 | 149 | 34 | 0.021 | ||
| SMART | 116 | 151 | 36 | 0.0044 | ||
| SMART | 152 | 187 | 36 | 1.20E-06 | ||
| Pfam | 153 | 187 | 35 | 1.70E-06 | ||
| PANTHER | 198 | 433 | 236 | 6.30E-191 | – | |
| PANTHER | 198 | 433 | 236 | 6.30E-191 | – | |
| Gene3D | 200 | 333 | 134 | 7.70E-41 | ||
| SUPERFAMILY | 201 | 357 | 157 | 1.26E-41 | ||
| PRINTS | 206 | 221 | 16 | 4.50E-34 | ||
| PRINTS | 224 | 242 | 19 | 4.50E-34 | ||
| ProSiteProfiles | 225 | 339 | 115 | 27.74 | ||
| PRINTS | 237 | 251 | 15 | 5.10E-50 | ||
| SMART | 242 | 329 | 88 | 4.10E-42 | ||
| Pfam | 243 | 329 | 87 | 5.60E-18 | ||
| PRINTS | 246 | 264 | 19 | 4.50E-34 | ||
| PRINTS | 264 | 275 | 12 | 5.10E-50 | ||
| PRINTS | 278 | 288 | 11 | 5.10E-50 | ||
| PRINTS | 297 | 314 | 18 | 5.10E-50 | ||
| PRINTS | 314 | 327 | 14 | 5.10E-50 | ||
| PRINTS | 322 | 338 | 17 | 4.50E-34 | ||
| Gene3D | 334 | 430 | 97 | 1.90E-30 | ||
| SUPERFAMILY | 336 | 428 | 93 | 1.44E-30 | ||
| PRINTS | 338 | 350 | 13 | 5.10E-50 | ||
| Pfam | 341 | 417 | 77 | 5.20E-23 | ||
| ProSiteProfiles | 349 | 428 | 80 | 20.705 | ||
| PRINTS | 350 | 371 | 22 | 5.10E-50 | ||
| PRINTS | 376 | 390 | 15 | 4.50E-34 | ||
| PRINTS | 385 | 406 | 22 | 5.10E-50 | ||
| PRINTS | 414 | 430 | 17 | 5.10E-50 | ||
| PRINTS | 414 | 428 | 15 | 4.50E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. | ||
| Biological process | Plant-type cell wall organization | A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana. |
Expression pattern of Lj0g3v0263569.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0263569.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.