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Expansin signature
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Plant-type cell wall organization | A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Expansin [Melilotus albus] gi|33324609|gb|AAQ08016.1| | 9 | ||
– | Expansin [Medicago truncatula] gi|357492247|ref|XP_003616412.1| | 21 | ||
– | PREDICTED: expansin-A4-like [Glycine max] gi|356558059|ref|XP_003547326.1| | 21 | ||
– | Expansin A5 [Glycine max] gi|359385909|gb|AEV43315.1| | 14 | ||
– | PREDICTED: expansin-A13-like [Glycine max] gi|356569776|ref|XP_003553072.1| | 25 | ||
– | PREDICTED: expansin-A12-like [Glycine max] gi|356514760|ref|XP_003526071.1| | 11 | ||
– | Alpha-expansin [Medicago truncatula] gi|357511619|ref|XP_003626098.1| | 25 | ||
– | PREDICTED: expansin-A4-like [Glycine max] gi|356567718|ref|XP_003552064.1| | 26 | ||
– | PREDICTED: expansin-A20-like [Cicer arietinum] gi|502168738|ref|XP_004514456.1| | 24 | ||
– | PREDICTED: expansin-A16-like [Glycine max] gi|356542918|ref|XP_003539911.1| | 24 | ||
– | Expansin [Medicago truncatula] gi|357502261|ref|XP_003621419.1| | 25 | ||
– | PREDICTED: expansin-A12-like [Glycine max] gi|356514760|ref|XP_003526071.1| | 25 | ||
– | PREDICTED: expansin-A15-like [Cicer arietinum] gi|502143644|ref|XP_004505412.1| | 20 | ||
– | PREDICTED: expansin-A15-like [Glycine max] gi|356508543|ref|XP_003523015.1| | 25 | ||
– | Alpha-expansin [Medicago truncatula] gi|357501937|ref|XP_003621257.1| | 23 | ||
– | Alpha-expansin [Medicago truncatula] gi|357502257|ref|XP_003621417.1| | 21 | ||
– | Orf [Pisum sativum] gi|732905|emb|CAA59470.1| | 26 | ||
– | PREDICTED: expansin-A16-like [Glycine max] gi|356570786|ref|XP_003553565.1| | 24 | ||
– | PREDICTED: expansin-A15-like [Glycine max] gi|356572744|ref|XP_003554526.1| | 23 | ||
– | PREDICTED: expansin-A7-like [Cicer arietinum] gi|502160071|ref|XP_004511623.1| | 25 | ||
– | PREDICTED: expansin-A13-like [Glycine max] gi|356500993|ref|XP_003519314.1| | 25 | ||
– | PREDICTED: expansin-A13-like [Glycine max] gi|356500993|ref|XP_003519314.1| | 25 | ||
– | Expansin [Medicago truncatula] gi|357492247|ref|XP_003616412.1| | 26 | ||
– | PREDICTED: expansin-A16-like [Glycine max] gi|356542918|ref|XP_003539911.1| | 13 | ||
– | PREDICTED: expansin-A4-like [Glycine max] gi|356539004|ref|XP_003537990.1| | 25 | ||
– | PREDICTED: expansin-A15-like [Glycine max] gi|356562854|ref|XP_003549683.1| | 25 | ||
– | Alpha-expansin [Medicago truncatula] gi|357511619|ref|XP_003626098.1| | 25 | ||
– | PREDICTED: expansin-A8-like [Cicer arietinum] gi|502129592|ref|XP_004500357.1| | 25 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|G7KBR7|G7KBR7_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0089200 | 28 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151S197|A0A151S197_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0089200 | 12 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151S197|A0A151S197_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0089200 | 14 | ||
– | Expansin; TAIR: AT3G03220.1 expansin A13; Swiss-Prot: sp|Q9M9P0|EXP13_ARATH Expansin-A13; TrEMBL-Plants: tr|I1JHS2|I1JHS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0099800 | 27 | ||
– | Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I1JHL8|I1JHL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106800 | 27 | ||
– | Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I1JHL8|I1JHL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106800 | 20 | ||
– | Expansin; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|A0A151RX84|A0A151RX84_CAJCA Expansin-A15; Found in the gene: LotjaGi1g1v0220500 | 27 | ||
– | Expansin; TAIR: AT1G69530.4 expansin A1; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|A0A151RX84|A0A151RX84_CAJCA Expansin-A15; Found in the gene: LotjaGi1g1v0220500 | 27 | ||
– | Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|A0A072VBI6|A0A072VBI6_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0307600 | 26 | ||
– | Expansin protein; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 | 26 | ||
– | Expansin protein; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 | 26 | ||
– | Expansin protein; TAIR: AT3G29030.1 expansin A5; Swiss-Prot: sp|Q38864|EXPA5_ARATH Expansin-A5; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 | 20 | ||
– | Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510200 | 27 | ||
– | Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510300 | 27 | ||
– | Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|A0A151TCF6|A0A151TCF6_CAJCA Expansin-A22; Found in the gene: LotjaGi1g1v0510400 | 14 | ||
– | Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510600 | 28 | ||
– | Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510700 | 27 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151TMA5|A0A151TMA5_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0575800 | 28 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|Q852A1|EXPA7_ORYSJ Expansin-A7; TrEMBL-Plants: tr|G9FTF9|G9FTF9_SOYBN Expansin A5a; Found in the gene: LotjaGi1g1v0575800 | 14 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151TMA5|A0A151TMA5_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0575800 | 21 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0R0JDM2|A0A0R0JDM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0580000 | 27 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0R0JDM2|A0A0R0JDM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0580000 | 27 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|Q41043|Q41043_PEA Orf protein; Found in the gene: LotjaGi1g1v0580000 | 20 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|Q41043|Q41043_PEA Orf protein; Found in the gene: LotjaGi1g1v0580000 | 20 | ||
– | Expansin; TAIR: AT5G02260.1 expansin A9; Swiss-Prot: sp|Q9LZ99|EXPA9_ARATH Expansin-A9; TrEMBL-Plants: tr|A0A0B2NZ29|A0A0B2NZ29_GLYSO Expansin-A16; Found in the gene: LotjaGi1g1v0685400 | 28 | ||
– | Expansin protein; TAIR: AT2G03090.1 expansin A15; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|I1N660|I1N660_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260200 | 26 | ||
– | Expansin protein; TAIR: AT2G03090.1 expansin A15; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|I1N660|I1N660_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260200 | 26 | ||
– | Expansin; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|Q8L5G4|Q8L5G4_CICAR Alpha-expansin 4; Found in the gene: LotjaGi2g1v0302000 | 26 | ||
– | Expansin; TAIR: AT1G69530.4 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|Q8L5G4|Q8L5G4_CICAR Alpha-expansin 4; Found in the gene: LotjaGi2g1v0302000 | 26 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0S3SD28|A0A0S3SD28_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0373800 | 27 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0L9T6H1|A0A0L9T6H1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0373800 | 12 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0S3SD28|A0A0S3SD28_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0373800 | 28 | ||
– | Expansin-like protein; TAIR: AT1G12560.1 expansin A7; Swiss-Prot: sp|Q9LN94|EXPA7_ARATH Expansin-A7; TrEMBL-Plants: tr|G7KET8|G7KET8_MEDTR Expansin A10; Found in the gene: LotjaGi2g1v0429600 | 27 | ||
– | Expansin-like protein; TAIR: AT1G12560.1 expansin A7; Swiss-Prot: sp|Q8W2X8|EXP30_ORYSJ Putative expansin-A30; TrEMBL-Plants: tr|A0A0R4J4A3|A0A0R4J4A3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0429600 | 21 | ||
– | Expansin; TAIR: AT3G15370.1 expansin 12; Swiss-Prot: sp|Q9LDJ3|EXP12_ARATH Expansin-A12; TrEMBL-Plants: tr|A0A1J7I5Z0|A0A1J7I5Z0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049100 | 27 | ||
– | Expansin; TAIR: AT3G15370.1 expansin 12; Swiss-Prot: sp|Q9LDJ3|EXP12_ARATH Expansin-A12; TrEMBL-Plants: tr|A0A1J7I5Z0|A0A1J7I5Z0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049100 | 20 | ||
– | Expansin; TAIR: AT3G15370.1 expansin 12; Swiss-Prot: sp|Q9LDJ3|EXP12_ARATH Expansin-A12; TrEMBL-Plants: tr|A0A1J7I5Z0|A0A1J7I5Z0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049100 | 12 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|V7AL52|V7AL52_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0225600 | 27 | ||
– | Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0S3SX45|A0A0S3SX45_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225600 | 14 | ||
– | Expansin; TAIR: AT4G38210.1 expansin A20; Swiss-Prot: sp|Q69XV9|EXP16_ORYSJ Expansin-A16; TrEMBL-Plants: tr|A0A072VBW9|A0A072VBW9_MEDTR Expansin A1; Found in the gene: LotjaGi3g1v0443400 | 12 | ||
– | Expansin; TAIR: AT4G38210.1 expansin A20; Swiss-Prot: sp|Q9SZM1|EXP20_ARATH Expansin-A20; TrEMBL-Plants: tr|A0A151RWL0|A0A151RWL0_CAJCA Expansin-A16; Found in the gene: LotjaGi3g1v0455600 | 26 | ||
– | Expansin-like protein; TAIR: AT1G12560.1 expansin A7; Swiss-Prot: sp|Q8W2X8|EXP30_ORYSJ Putative expansin-A30; TrEMBL-Plants: tr|K7MLG9|K7MLG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0217400 | 21 | ||
– | Expansin-like protein; TAIR: AT1G12560.1 expansin A7; Swiss-Prot: sp|Q9LN94|EXPA7_ARATH Expansin-A7; TrEMBL-Plants: tr|A0A072UQP8|A0A072UQP8_MEDTR Expansin A10; Found in the gene: LotjaGi4g1v0217400 | 27 | ||
– | Expansin-like protein; TAIR: AT1G12560.1 expansin A7; Swiss-Prot: sp|Q9LN94|EXPA7_ARATH Expansin-A7; TrEMBL-Plants: tr|A0A072UQP8|A0A072UQP8_MEDTR Expansin A10; Found in the gene: LotjaGi4g1v0217400 | 27 | ||
– | Expansin; TAIR: AT2G03090.1 expansin A15; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|I3SDR2|I3SDR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0250200 | 27 | ||
– | Expansin; TAIR: AT2G03090.1 expansin A15; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|I3SDR2|I3SDR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0250200 | 27 | ||
– | Expansin; TAIR: AT1G20190.1 expansin 11; Swiss-Prot: sp|Q9LNU3|EXP11_ARATH Expansin-A11; TrEMBL-Plants: tr|V6CKR0|V6CKR0_SOYBN Expansin; Found in the gene: LotjaGi5g1v0003400 | 24 | ||
– | Expansin; TAIR: AT1G20190.1 expansin 11; Swiss-Prot: sp|Q9LNU3|EXP11_ARATH Expansin-A11; TrEMBL-Plants: tr|V6CKR0|V6CKR0_SOYBN Expansin; Found in the gene: LotjaGi5g1v0003400 | 28 | ||
– | Expansin; TAIR: AT1G20190.1 expansin 11; Swiss-Prot: sp|Q9LNU3|EXP11_ARATH Expansin-A11; TrEMBL-Plants: tr|A0A1J7HNC8|A0A1J7HNC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0003400 | 12 | ||
– | Expansin; TAIR: AT1G20190.1 expansin 11; Swiss-Prot: sp|Q9LNU3|EXP11_ARATH Expansin-A11; TrEMBL-Plants: tr|A0A1J7HNC8|A0A1J7HNC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0003400 | 12 | ||
– | Expansin; TAIR: AT4G01630.1 expansin A17; Swiss-Prot: sp|Q9ZSI1|EXP17_ARATH Putative expansin-A17; TrEMBL-Plants: tr|A0A151SS33|A0A151SS33_CAJCA Putative expansin-A17; Found in the gene: LotjaGi5g1v0236000 | 27 | ||
– | Expansin; TAIR: AT4G01630.1 expansin A17; Swiss-Prot: sp|Q9ZSI1|EXP17_ARATH Putative expansin-A17; TrEMBL-Plants: tr|A0A0R4J4B0|A0A0R4J4B0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0236000 | 27 | ||
– | Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I3SLK8|I3SLK8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0042100 | 27 | ||
– | Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I3SLK8|I3SLK8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0042100 | 20 | ||
– | Expansin; TAIR: AT3G03220.1 expansin A13; Swiss-Prot: sp|Q9M9P0|EXP13_ARATH Expansin-A13; TrEMBL-Plants: tr|A0A0R0EW23|A0A0R0EW23_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052100 | 27 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SignalP-noTM | SignalP_GRAM_NEGATIVE | 1 | 1.20 |