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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002963
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 83 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.533s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0013429.1
n.a. expansin [Melilotus albus] gi|33324609|gb|AAQ08016.1| chr0 5070945 5071779 -
2 domain predictions
1 GO term
Lj0g3v0013599.1
n.a. Expansin [Medicago truncatula] gi|357492247|ref|XP_003616412.1| chr0 5140797 5141387 +
2 domain predictions
1 GO term
Lj0g3v0020719.1
n.a. PREDICTED: expansin-A4-like [Glycine max] gi|356558059|ref|XP_003547326.1| chr0 8321037 8321548 +
2 domain predictions
1 GO term
Lj0g3v0020729.1
n.a. expansin A5 [Glycine max] gi|359385909|gb|AEV43315.1| chr0 8321531 8323452 +
2 domain predictions
1 GO term
Lj0g3v0094659.1
n.a. PREDICTED: expansin-A13-like [Glycine max] gi|356569776|ref|XP_003553072.1| chr0 39789711 39791680 +
2 domain predictions
1 GO term
Lj0g3v0095149.1
n.a. PREDICTED: expansin-A12-like [Glycine max] gi|356514760|ref|XP_003526071.1| chr0 40074467 40074718 +
2 domain predictions
1 GO term
Lj0g3v0165549.1
n.a. Alpha-expansin [Medicago truncatula] gi|357511619|ref|XP_003626098.1| chr0 78627508 78628540 +
2 domain predictions
1 GO term
Lj0g3v0189629.1
n.a. PREDICTED: expansin-A4-like [Glycine max] gi|356567718|ref|XP_003552064.1| chr0 92696362 92699244 +
2 domain predictions
1 GO term
Lj0g3v0263569.1
n.a. PREDICTED: expansin-A20-like [Cicer arietinum] gi|502168738|ref|XP_004514456.1| chr0 136647645 136655098 +
2 domain predictions
1 GO term
Lj0g3v0263569.2
n.a. PREDICTED: expansin-A16-like [Glycine max] gi|356542918|ref|XP_003539911.1| chr0 136653427 136655098 +
2 domain predictions
1 GO term
Lj0g3v0276159.1
n.a. Expansin [Medicago truncatula] gi|357502261|ref|XP_003621419.1| chr0 143247617 143248913 -
2 domain predictions
1 GO term
Lj0g3v0287409.1
n.a. PREDICTED: expansin-A12-like [Glycine max] gi|356514760|ref|XP_003526071.1| chr0 149341878 149344699 +
2 domain predictions
1 GO term
Lj0g3v0359999.1
n.a. PREDICTED: expansin-A15-like [Cicer arietinum] gi|502143644|ref|XP_004505412.1| chr0 189610320 189612245 +
2 domain predictions
1 GO term
Lj1g3v0514350.1
n.a. PREDICTED: expansin-A15-like [Glycine max] gi|356508543|ref|XP_003523015.1| chr1 6567062 6569529 -
2 domain predictions
1 GO term
Lj1g3v2979160.1
n.a. Alpha-expansin [Medicago truncatula] gi|357501937|ref|XP_003621257.1| chr1 33808949 33811273 -
2 domain predictions
1 GO term
Lj1g3v3008810.1
n.a. Alpha-expansin [Medicago truncatula] gi|357502257|ref|XP_003621417.1| chr1 34206769 34207589 +
2 domain predictions
1 GO term
Lj1g3v3444290.1
n.a. orf [Pisum sativum] gi|732905|emb|CAA59470.1| chr1 39976230 39978611 +
2 domain predictions
1 GO term
Lj1g3v4668270.1
n.a. PREDICTED: expansin-A16-like [Glycine max] gi|356570786|ref|XP_003553565.1| chr1 55412469 55414477 -
2 domain predictions
1 GO term
Lj2g3v1068330.1
n.a. PREDICTED: expansin-A15-like [Glycine max] gi|356572744|ref|XP_003554526.1| chr2 16968174 16970314 -
2 domain predictions
1 GO term
Lj2g3v2002970.1
n.a. PREDICTED: expansin-A7-like [Cicer arietinum] gi|502160071|ref|XP_004511623.1| chr2 30574627 30576081 +
2 domain predictions
1 GO term
Lj2g3v2510040.1
n.a. PREDICTED: expansin-A13-like [Glycine max] gi|356500993|ref|XP_003519314.1| chr2 34902062 34905631 -
2 domain predictions
1 GO term
Lj2g3v2510040.2
n.a. PREDICTED: expansin-A13-like [Glycine max] gi|356500993|ref|XP_003519314.1| chr2 34902487 34905631 -
2 domain predictions
1 GO term
Lj2g3v2598860.1
n.a. Expansin [Medicago truncatula] gi|357492247|ref|XP_003616412.1| chr2 35526106 35531451 -
2 domain predictions
1 GO term
Lj3g3v2807980.1
n.a. PREDICTED: expansin-A16-like [Glycine max] gi|356542918|ref|XP_003539911.1| chr3 34356518 34358561 -
2 domain predictions
1 GO term
Lj3g3v3200920.1
n.a. PREDICTED: expansin-A4-like [Glycine max] gi|356539004|ref|XP_003537990.1| chr3 39552996 39555538 -
2 domain predictions
1 GO term
Lj4g3v1645630.1
n.a. PREDICTED: expansin-A15-like [Glycine max] gi|356562854|ref|XP_003549683.1| chr4 24109245 24112724 -
2 domain predictions
1 GO term
Lj5g3v1537650.1
n.a. Alpha-expansin [Medicago truncatula] gi|357511619|ref|XP_003626098.1| chr5 22611849 22613577 -
2 domain predictions
1 GO term
Lj6g3v0315120.1
n.a. PREDICTED: expansin-A8-like [Cicer arietinum] gi|502129592|ref|XP_004500357.1| chr6 3103454 3105991 -
2 domain predictions
1 GO term
LotjaGi1g1v0089200.1
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|G7KBR7|G7KBR7_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0089200 LjG1.1_chr1 13016756 13021748 +
2 domain predictions
1 GO term
LotjaGi1g1v0089200.2
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151S197|A0A151S197_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0089200 LjG1.1_chr1 13017080 13021249 +
2 domain predictions
1 GO term
LotjaGi1g1v0089200.3
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151S197|A0A151S197_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0089200 LjG1.1_chr1 13017297 13021249 +
2 domain predictions
1 GO term
LotjaGi1g1v0099800.1
n.a. Expansin; TAIR: AT3G03220.1 expansin A13; Swiss-Prot: sp|Q9M9P0|EXP13_ARATH Expansin-A13; TrEMBL-Plants: tr|I1JHS2|I1JHS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0099800 LjG1.1_chr1 15205821 15209754 +
2 domain predictions
1 GO term
LotjaGi1g1v0106800.1
n.a. Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I1JHL8|I1JHL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106800 LjG1.1_chr1 16592810 16596030 +
2 domain predictions
1 GO term
LotjaGi1g1v0106800.2
n.a. Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|I1JHL8|I1JHL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106800 LjG1.1_chr1 16593036 16594860 +
2 domain predictions
1 GO term
LotjaGi1g1v0220500.1
n.a. Expansin; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|A0A151RX84|A0A151RX84_CAJCA Expansin-A15; Found in the gene: LotjaGi1g1v0220500 LjG1.1_chr1 49031313 49034088 +
2 domain predictions
1 GO term
LotjaGi1g1v0220500.2
n.a. Expansin; TAIR: AT1G69530.4 expansin A1; Swiss-Prot: sp|O80622|EXP15_ARATH Expansin-A15; TrEMBL-Plants: tr|A0A151RX84|A0A151RX84_CAJCA Expansin-A15; Found in the gene: LotjaGi1g1v0220500 LjG1.1_chr1 49031565 49033378 +
2 domain predictions
1 GO term
LotjaGi1g1v0307600.1
n.a. Expansin; TAIR: AT2G40610.1 expansin A8; Swiss-Prot: sp|O22874|EXPA8_ARATH Expansin-A8; TrEMBL-Plants: tr|A0A072VBI6|A0A072VBI6_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0307600 LjG1.1_chr1 74865322 74867208 +
2 domain predictions
1 GO term
LotjaGi1g1v0505000.1
n.a. Expansin protein; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 LjG1.1_chr1 102289912 102292458 -
2 domain predictions
1 GO term
LotjaGi1g1v0505000.2
n.a. Expansin protein; TAIR: AT1G69530.1 expansin A1; Swiss-Prot: sp|Q9C554|EXPA1_ARATH Expansin-A1; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 LjG1.1_chr1 102289973 102292524 -
2 domain predictions
1 GO term
LotjaGi1g1v0505000.3
n.a. Expansin protein; TAIR: AT3G29030.1 expansin A5; Swiss-Prot: sp|Q38864|EXPA5_ARATH Expansin-A5; TrEMBL-Plants: tr|G7L212|G7L212_MEDTR Expansin A10; Found in the gene: LotjaGi1g1v0505000 LjG1.1_chr1 102290501 102292127 -
2 domain predictions
1 GO term
LotjaGi1g1v0510200.1
n.a. Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510200 LjG1.1_chr1 102888613 102889787 +
2 domain predictions
1 GO term
LotjaGi1g1v0510300.1
n.a. Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510300 LjG1.1_chr1 102946788 102948022 +
2 domain predictions
1 GO term
LotjaGi1g1v0510400.1
n.a. Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|A0A151TCF6|A0A151TCF6_CAJCA Expansin-A22; Found in the gene: LotjaGi1g1v0510400 LjG1.1_chr1 102966960 102967654 +
2 domain predictions
1 GO term
LotjaGi1g1v0510600.1
n.a. Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510600 LjG1.1_chr1 102982012 102983398 +
2 domain predictions
1 GO term
LotjaGi1g1v0510700.1
n.a. Expansin; TAIR: AT5G39280.1 expansin A23; Swiss-Prot: sp|Q9FL79|EXP23_ARATH Expansin-A23; TrEMBL-Plants: tr|I3SEA3|I3SEA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510700 LjG1.1_chr1 103018418 103020313 +
2 domain predictions
1 GO term
LotjaGi1g1v0575800.1
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151TMA5|A0A151TMA5_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0575800 LjG1.1_chr1 111264376 111273185 -
2 domain predictions
1 GO term
LotjaGi1g1v0575800.2
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|Q852A1|EXPA7_ORYSJ Expansin-A7; TrEMBL-Plants: tr|G9FTF9|G9FTF9_SOYBN Expansin A5a; Found in the gene: LotjaGi1g1v0575800 LjG1.1_chr1 111271293 111272717 -
2 domain predictions
1 GO term
LotjaGi1g1v0575800.3
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A151TMA5|A0A151TMA5_CAJCA Expansin-A4; Found in the gene: LotjaGi1g1v0575800 LjG1.1_chr1 111271293 111272875 -
2 domain predictions
1 GO term
LotjaGi1g1v0580000.1
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0R0JDM2|A0A0R0JDM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0580000 LjG1.1_chr1 111942723 111944897 +
2 domain predictions
1 GO term
LotjaGi1g1v0580000.2
n.a. Expansin; TAIR: AT2G39700.1 expansin A4; Swiss-Prot: sp|O48818|EXPA4_ARATH Expansin-A4; TrEMBL-Plants: tr|A0A0R0JDM2|A0A0R0JDM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0580000 LjG1.1_chr1 111942771 111945457 +
2 domain predictions
1 GO term