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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0283109 |
| Transcript ID | Lj0g3v0283109.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein FIZZY-RELATED 3-like [Glycine max] gi|356569370|ref|XP_003552875.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | – | – | |
| Gene3D | 39 | 250 | 212 | 2.90E-35 | ||
| SUPERFAMILY | 46 | 250 | 205 | 2.88E-36 | ||
| SMART | 48 | 89 | 42 | 200 | ||
| ProSiteProfiles | 85 | 661 | 577 | 34.724 | ||
| SMART | 91 | 132 | 42 | 1.3 | ||
| SMART | 135 | 172 | 38 | 0.88 | ||
| SMART | 176 | 215 | 40 | 3.50E-07 | ||
| Pfam | 180 | 215 | 36 | 7.80E-05 | ||
| ProSiteProfiles | 183 | 224 | 42 | 12.848 | ||
| SMART | 218 | 256 | 39 | 0.75 | ||
| PANTHER | 253 | 665 | 413 | 0 | ||
| PANTHER | 253 | 665 | 413 | 0 | – | |
| MobiDBLite | 293 | 361 | 69 | – | – | |
| Gene3D | 346 | 652 | 307 | 3.80E-58 | ||
| SUPERFAMILY | 353 | 653 | 301 | 1.60E-57 | ||
| SMART | 355 | 396 | 42 | 200 | ||
| SMART | 398 | 439 | 42 | 1.3 | ||
| SMART | 442 | 479 | 38 | 0.88 | ||
| SMART | 483 | 522 | 40 | 3.50E-07 | ||
| Pfam | 487 | 522 | 36 | 7.80E-05 | ||
| ProSiteProfiles | 490 | 531 | 42 | 12.848 | ||
| Pfam | 523 | 649 | 127 | 5.90E-05 | ||
| SMART | 525 | 567 | 43 | 5.50E-05 | ||
| ProSiteProfiles | 532 | 576 | 45 | 8.537 | ||
| ProSitePatterns | 554 | 568 | 15 | – | ||
| SMART | 613 | 652 | 40 | 4.50E-07 | ||
| ProSiteProfiles | 620 | 653 | 34 | 14.318 | ||
| ProSitePatterns | 639 | 653 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Anaphase-promoting complex binding | Interacting selectively and non-covalently with an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. | ||
| Molecular function | Ubiquitin-protein transferase activator activity | Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein. | ||
| Biological process | Positive regulation of ubiquitin protein ligase activity | Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity. |
Expression pattern of Lj0g3v0283109.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0283109.3, powered by CORGI.
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