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Field | Value |
---|---|
Namespace | Molecular function |
Short description | Ubiquitin-protein transferase activator activity |
Full defintion | Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein. |
Subterm of |
The relationship of GO:0097027 with other GO terms.
Relationship type | GO terms |
---|---|
Is a | |
Regulates | n.a. |
Part of | n.a. |
Positively regulates | n.a. |
Negatively regulates | n.a. |
A force layout showing the ancestor tree for GO:0097027, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.
This table contains additional metadata associated with the GO entry's definition field.
Field | Value |
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GOC | rb |
PMID | Cue1p is an activator of Ubc7p E2 activity in vitro and in vivo. J Biol Chem. 2008 May 9; 283 (19): 12797–810.PMID: 18321851 Ubc7p is a ubiquitin-conjugating enzyme (E2) that functions with endoplasmic reticulum (ER)-resident ubiquitin ligases (E3s) to promote endoplasmic reticulum-associated degradation (ERAD). Ubc7p only functions in ERAD if bound to the ER surface by Cue1p, a membrane-anchored ER protein. The role of Cue1p was thought to involve passive concentration of Ubc7p at the surface of the ER. However, our biochemical studies of Ubc7p suggested that Cue1p may, in addition, stimulate Ubc7p E2 activity. We have tested this idea and found it to be true both in vitro and in vivo. Ubc7p bound to the soluble domain of Cue1p showed strongly enhanced in vitro ubiquitination activity, both in the presence and absence of E3. Cue1p also enhanced Ubc7p function in vivo, and this activation was separable from the established ER-anchoring role of Cue1p. Finally, we tested in vivo activation of Ubc7p by Cue1p in an assay independent of the ER membrane and ERAD. A chimeric E2 linking Ubc7p to the Cdc34p/Ubc3p localization domain complemented the cdc34-2 TS phenotype, and co-expression of the soluble Cue1p domain enhanced complementation by this chimeric Ubc7p E2. These studies reveal a previously unobserved stimulation of Ubc7p E2 activity by Cue1p that is critical for full ERAD and that functions independently of the well known Cue1p anchoring function. Moreover, it suggests a previously unappreciated mode for regulation of E2s by Cue1p-like interacting partners. |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Transcript | Name | Description | GO terms | GO count |
---|---|---|---|---|
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Glycine max] gi|356533257|ref|XP_003535182.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Cicer arietinum] gi|502122681|ref|XP_004497861.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Glycine max] gi|356533257|ref|XP_003535182.1| | 3 | ||
– | WD-repeat cell cycle regulatory protein [Glycine max] gi|351727655|ref|NP_001237168.1| | 3 | ||
– | PREDICTED: protein FIZZY-RELATED 3-like [Glycine max] gi|356569370|ref|XP_003552875.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Glycine max] gi|356533257|ref|XP_003535182.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Cicer arietinum] gi|502112266|ref|XP_004494277.1| | 3 | ||
– | PREDICTED: protein FIZZY-RELATED 2-like [Glycine max] gi|356565305|ref|XP_003550882.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Glycine max] gi|356497369|ref|XP_003517533.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20 [Vitis vinifera] gi|225463838|ref|XP_002264396.1| | 3 | ||
– | PREDICTED: protein FIZZY-RELATED 2-like [Glycine max] gi|356565305|ref|XP_003550882.1| | 3 | ||
– | Cell cycle switch protein CCS52A [Lotus japonicus] gi|66932877|gb|AAY58271.1| | 3 | ||
– | Cell cycle switch protein CCS52A [Lotus japonicus] gi|66932877|gb|AAY58271.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Cicer arietinum] gi|502122681|ref|XP_004497861.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Cicer arietinum] gi|502122681|ref|XP_004497861.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Cicer arietinum] gi|502122681|ref|XP_004497861.1| | 3 | ||
– | PREDICTED: anaphase-promoting complex subunit cdc20-like [Glycine max] gi|356533257|ref|XP_003535182.1| | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A151SFQ0|A0A151SFQ0_CAJCA Anaphase-promoting complex subunit cdc20; Found in the gene: LotjaGi1g1v0202500 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0210300 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A1J7HIB5|A0A1J7HIB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673600 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673600 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A1J7HIB5|A0A1J7HIB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673600 | 3 | ||
– | WD-repeat cell cycle regulatory protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A5BP73|A5BP73_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0740400 | 3 | ||
– | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FRG3|A0A024FRG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429800 | 3 | ||
– | WD-repeat cell cycle regulatory protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A0A0L9TAL3|A0A0L9TAL3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0447700 | 3 | ||
– | WD repeat-containing protein 1; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0132100_LC | 3 | ||
– | WD-repeat protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0132200_LC | 3 | ||
– | WD-repeat cell cycle regulatory protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A5BP73|A5BP73_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0220800 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A5BP73|A5BP73_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0220800 | 3 | ||
– | WD-repeat cell cycle regulatory protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A5BP73|A5BP73_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0316200 | 3 | ||
– | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FSI1|A0A024FSI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0217500 | 3 | ||
– | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FSI1|A0A024FSI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0217500 | 3 | ||
– | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FSI1|A0A024FSI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0217500 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A151SFQ0|A0A151SFQ0_CAJCA Anaphase-promoting complex subunit cdc20; Found in the gene: LotjaGi6g1v0016000 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|A0A1J7HIB5|A0A1J7HIB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0017200_LC | 3 | ||
– | WD-repeat protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9S7I8|CDC22_ARATH Cell division cycle 20.2, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0018900 | 3 | ||
– | WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0019100_LC | 3 | ||
– | WD-repeat cell cycle regulatory protein; TAIR: AT5G13840.1 FIZZY-related 3; Swiss-Prot: sp|Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3; TrEMBL-Plants: tr|A0A0L9U9C3|A0A0L9U9C3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0062300 | 3 |
A list of co-occurring GO terms within the L. japonicus gene space:
GO term | Namespace | Name | Observations | Saturation (%) |
---|---|---|---|---|
Biological process | Positive regulation of ubiquitin protein ligase activity | 1 | 2.63 |