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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300949 |
| Transcript ID | Lj0g3v0300949.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356566246|ref|XP_003551345.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 498 | 498 | 0 | – | |
| PANTHER | 1 | 498 | 498 | 0 | – | |
| ProSiteProfiles | 1 | 211 | 211 | 30.031 | ||
| Phobius | 1 | 40 | 40 | – | – | |
| SUPERFAMILY | 2 | 230 | 229 | 2.88E-46 | ||
| Gene3D | 7 | 229 | 223 | 1.30E-50 | – | |
| Pfam | 10 | 174 | 165 | 2.90E-26 | ||
| Phobius | 41 | 58 | 18 | – | – | |
| TMHMM | 45 | 62 | 18 | – | – | |
| Phobius | 59 | 64 | 6 | – | – | |
| Phobius | 65 | 83 | 19 | – | – | |
| TMHMM | 66 | 83 | 18 | – | – | |
| Phobius | 84 | 158 | 75 | – | – | |
| TMHMM | 153 | 175 | 23 | – | – | |
| Phobius | 159 | 176 | 18 | – | – | |
| Phobius | 177 | 182 | 6 | – | – | |
| Phobius | 183 | 204 | 22 | – | – | |
| Phobius | 205 | 498 | 294 | – | – | |
| SUPERFAMILY | 238 | 479 | 242 | 3.26E-64 | ||
| CDD | 246 | 466 | 221 | 1.72E-124 | – | |
| ProSiteProfiles | 248 | 482 | 235 | 18.874 | ||
| Gene3D | 248 | 483 | 236 | 3.40E-61 | ||
| Pfam | 266 | 413 | 148 | 5.70E-30 | ||
| SMART | 274 | 466 | 193 | 1.40E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0300949.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300949.1, powered by CORGI.
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