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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0323809 |
| Transcript ID | Lj0g3v0323809.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ABC transporter ATP-binding protein [Medicago truncatula] gi|357479203|ref|XP_003609887.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 108 | 108 | 1.98E-39 | ||
| Phobius | 1 | 213 | 213 | – | – | |
| Gene3D | 2 | 118 | 117 | 1.40E-38 | ||
| PANTHER | 3 | 384 | 382 | 3.80E-150 | – | |
| Pfam | 3 | 37 | 35 | 4.00E-10 | ||
| PANTHER | 3 | 384 | 382 | 3.80E-150 | – | |
| SUPERFAMILY | 197 | 381 | 185 | 6.67E-35 | ||
| Gene3D | 198 | 381 | 184 | 4.00E-31 | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Pfam | 210 | 382 | 173 | 3.10E-35 | ||
| ProSiteProfiles | 213 | 382 | 170 | 28.357 | ||
| Phobius | 214 | 238 | 25 | – | – | |
| Phobius | 239 | 249 | 11 | – | – | |
| Phobius | 250 | 268 | 19 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 269 | 350 | 82 | – | – | |
| TMHMM | 328 | 347 | 20 | – | – | |
| TMHMM | 351 | 370 | 20 | – | – | |
| Phobius | 351 | 370 | 20 | – | – | |
| Phobius | 371 | 388 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0323809.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0323809.1, powered by CORGI.
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