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Lj0g3v0334159.1

Overview

Field Value
Gene ID Lj0g3v0334159
Transcript ID Lj0g3v0334159.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: fidgetin-like protein 1-like [Glycine max] gi|356511805|ref|XP_003524613.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
136 175 40 – –
PANTHER
PTHR23074:SF17
284 651 368 3.90E-201 –
PANTHER
PTHR23074
284 651 368 3.90E-201 –
MobiDBLite
mobidb-lite
304 328 25 – –
Gene3D
G3DSA:3.40.50.300
364 574 211 2.00E-68
IPR027417
SUPERFAMILY
SSF52540
372 649 278 1.51E-62
IPR027417
CDD
cd00009
406 543 138 6.24E-25 –
SMART
SM00382
409 545 137 1.10E-19
IPR003593
Pfam
PF00004
413 543 131 5.50E-38
IPR003959
ProSitePatterns
PS00674
515 534 20 –
IPR003960
Gene3D
G3DSA:1.10.8.60
575 637 63 8.60E-12 –
Pfam
PF09336
616 650 35 3.90E-09
IPR015415

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 98

Expression data

Expression pattern

Expression pattern of Lj0g3v0334159.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0334159.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.