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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0337689 |
| Transcript ID | Lj0g3v0337689.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP]-forming] gi|502132343|ref|XP_004501313.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 274 | 274 | – | – | |
| MobiDBLite | 1 | 30 | 30 | – | – | |
| Gene3D | 25 | 114 | 90 | 2.90E-36 | ||
| SUPERFAMILY | 25 | 112 | 88 | 2.59E-37 | – | |
| Pfam | 30 | 107 | 78 | 5.10E-43 | ||
| ProSiteProfiles | 40 | 86 | 47 | 9.052 | ||
| PANTHER | 77 | 667 | 591 | 0 | – | |
| PANTHER | 77 | 667 | 591 | 0 | – | |
| MobiDBLite | 118 | 158 | 41 | – | – | |
| Phobius | 275 | 293 | 19 | – | – | |
| Phobius | 294 | 304 | 11 | – | – | |
| Phobius | 305 | 324 | 20 | – | – | |
| Phobius | 325 | 766 | 442 | – | – | |
| Pfam | 358 | 759 | 402 | 1.10E-211 | ||
| SUPERFAMILY | 376 | 419 | 44 | 7.20E-08 | ||
| Coils | 456 | 476 | 21 | – | – | |
| SUPERFAMILY | 519 | 658 | 140 | 7.20E-08 | ||
| PANTHER | 707 | 759 | 53 | 0 | – | |
| PANTHER | 707 | 759 | 53 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Cellulose synthase (UDP-forming) activity | Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1). | ||
| Biological process | Cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. |
Expression pattern of Lj0g3v0337689.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0337689.1, powered by CORGI.
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