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Lj0g3v0359209.1

Overview

Field Value
Gene ID Lj0g3v0359209
Transcript ID Lj0g3v0359209.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description P-loop containing nucleoside triphosphate hydrolases superfamily protein [Theobroma cacao] gi|508776121|gb|EOY23377.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 307 307 0
PANTHER 1 307 307 0
MobiDBLite 66 108 43
PANTHER 332 601 270 0
MobiDBLite 332 371 40
PANTHER 332 601 270 0
SUPERFAMILY 389 601 213 8.72E-55
Gene3D 390 569 180 9.00E-58
CDD 396 561 166 2.40E-23
SMART 426 563 138 2.00E-20
Pfam 430 560 131 4.50E-38
ProSitePatterns 533 552 20
Gene3D 570 601 32 3.90E-08

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Expression data

Expression pattern

Expression pattern of Lj0g3v0359209.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0359209.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.