Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0359309.1

Overview

Field Value
Gene ID Lj0g3v0359309
Transcript ID Lj0g3v0359309.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like [Glycine max] gi|356512187|ref|XP_003524802.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23074:SF92
1 152 152 2.10E-125 –
PANTHER
PTHR23074
1 152 152 2.10E-125 –
Gene3D
G3DSA:3.40.50.300
2 151 150 1.30E-49
IPR027417
SUPERFAMILY
SSF52540
4 151 148 2.92E-35
IPR027417
CDD
cd00009
13 150 138 5.93E-22 –
SMART
SM00382
15 152 138 2.80E-16
IPR003593
Pfam
PF00004
19 149 131 1.10E-38
IPR003959

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0359309.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0359309.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.