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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0001050 |
| Transcript ID | Lj1g3v0001050.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 37-like isoform X1 [Cicer arietinum] gi|502158779|ref|XP_004511280.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 235 | 235 | 35.131 | ||
| Phobius | 1 | 644 | 644 | – | – | |
| SUPERFAMILY | 9 | 114 | 106 | 6.16E-10 | ||
| PANTHER | 9 | 729 | 721 | 1.30E-231 | – | |
| PANTHER | 9 | 729 | 721 | 1.30E-231 | – | |
| Gene3D | 14 | 241 | 228 | 4.20E-41 | ||
| SMART | 26 | 64 | 39 | 300 | ||
| SMART | 65 | 99 | 35 | 13 | ||
| ProSiteProfiles | 66 | 99 | 34 | 5.812 | ||
| SUPERFAMILY | 131 | 235 | 105 | 7.08E-30 | ||
| SMART | 134 | 167 | 34 | 14 | ||
| ProSiteProfiles | 134 | 167 | 34 | 7.198 | ||
| Pfam | 168 | 199 | 32 | 5.70E-06 | ||
| ProSiteProfiles | 168 | 201 | 34 | 11.092 | ||
| SMART | 168 | 201 | 34 | 1.10E-04 | ||
| ProSiteProfiles | 202 | 235 | 34 | 9.381 | ||
| SMART | 202 | 235 | 34 | 1.2 | ||
| Pfam | 207 | 235 | 29 | 0.12 | ||
| Gene3D | 420 | 637 | 218 | 6.00E-17 | ||
| ProSiteProfiles | 427 | 460 | 34 | 9.496 | ||
| Pfam | 427 | 459 | 33 | 4.80E-05 | ||
| SUPERFAMILY | 427 | 464 | 38 | 7.08E-30 | ||
| ProSiteProfiles | 427 | 460 | 34 | 9.883 | ||
| SMART | 427 | 460 | 34 | 0.0085 | ||
| SUPERFAMILY | 514 | 558 | 45 | 7.08E-30 | ||
| SUPERFAMILY | 520 | 635 | 116 | 2.36E-08 | ||
| Phobius | 645 | 671 | 27 | – | – | |
| Phobius | 672 | 682 | 11 | – | – | |
| Phobius | 683 | 704 | 22 | – | – | |
| Phobius | 705 | 715 | 11 | – | – | |
| Phobius | 716 | 737 | 22 | – | – | |
| TMHMM | 719 | 741 | 23 | – | – | |
| Phobius | 738 | 747 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0001050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0001050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.