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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0948600 |
| Transcript ID | Lj1g3v0948600.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like [Glycine max] gi|356501755|ref|XP_003519689.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 276 | 276 | 2.90E-201 | ||
| Phobius | 1 | 18 | 18 | – | – | |
| PANTHER | 1 | 276 | 276 | 2.90E-201 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 18 | 4 | – | – | |
| Phobius | 19 | 148 | 130 | – | – | |
| SUPERFAMILY | 55 | 272 | 218 | 1.83E-56 | – | |
| Gene3D | 57 | 271 | 215 | 3.90E-65 | ||
| Pfam | 67 | 245 | 179 | 5.40E-47 | ||
| Phobius | 149 | 169 | 21 | – | – | |
| Phobius | 170 | 233 | 64 | – | – | |
| Phobius | 234 | 254 | 21 | – | – | |
| Phobius | 255 | 276 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Photosynthesis, light harvesting | Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj1g3v0948600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0948600.1, powered by CORGI.
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