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Lj1g3v0968900.1

Overview

Field Value
Gene ID Lj1g3v0968900
Transcript ID Lj1g3v0968900.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable phosphomevalonate kinase-like [Cicer arietinum] gi|502136293|ref|XP_004502634.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31814
1 507 507 8.20E-202 –
PIRSF
PIRSF017288
1 497 497 2.20E-202
IPR016005
Gene3D
G3DSA:3.30.230.10
2 261 260 8.50E-15
IPR014721
SUPERFAMILY
SSF54211
2 262 261 4.22E-22
IPR020568
TIGRFAM
TIGR01219
4 494 491 6.70E-171
IPR016005
Pfam
PF00288
178 252 75 1.20E-16
IPR006204
Gene3D
G3DSA:3.30.70.890
297 352 56 3.90E-11
IPR013750
Gene3D
G3DSA:3.30.70.890
393 485 93 3.90E-11
IPR013750
Pfam
PF08544
406 456 51 8.20E-06
IPR013750

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004631
Molecular function Phosphomevalonate kinase activity Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 28

Expression data

Expression pattern

Expression pattern of Lj1g3v0968900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0968900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.