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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1008930 |
| Transcript ID | Lj1g3v1008930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: U-box domain-containing protein 43-like [Glycine max] gi|356518651|ref|XP_003527992.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 795 | 795 | 0 | – | |
| PANTHER | 1 | 795 | 795 | 0 | – | |
| SUPERFAMILY | 49 | 125 | 77 | 1.61E-23 | – | |
| ProSiteProfiles | 52 | 126 | 75 | 31.094 | ||
| Gene3D | 55 | 113 | 59 | 6.80E-24 | ||
| SMART | 56 | 119 | 64 | 1.20E-20 | ||
| Pfam | 57 | 123 | 67 | 2.70E-17 | ||
| Gene3D | 114 | 501 | 388 | 1.20E-38 | ||
| SUPERFAMILY | 127 | 416 | 290 | 1.05E-28 | ||
| CDD | 252 | 363 | 112 | 2.43E-05 | – | |
| SMART | 323 | 363 | 41 | 1.30E-04 | ||
| Pfam | 324 | 363 | 40 | 5.60E-05 | ||
| SUPERFAMILY | 325 | 660 | 336 | 1.78E-31 | ||
| ProSiteProfiles | 334 | 376 | 43 | 9.432 | ||
| SMART | 364 | 407 | 44 | 160 | ||
| SMART | 544 | 590 | 47 | 130 | ||
| SUPERFAMILY | 576 | 640 | 65 | 1.23E-10 | ||
| SMART | 667 | 707 | 41 | 19 | ||
| SUPERFAMILY | 673 | 790 | 118 | 1.23E-10 | ||
| Gene3D | 674 | 789 | 116 | 1.20E-08 | ||
| CDD | 674 | 751 | 78 | 2.74E-04 | – | |
| SMART | 711 | 751 | 41 | 210 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj1g3v1008930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1008930.1, powered by CORGI.
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