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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1385260 |
| Transcript ID | Lj1g3v1385260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 27 homolog [Cicer arietinum] gi|502137243|ref|XP_004503019.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 114 | 114 | – | – | |
| PANTHER | 15 | 739 | 725 | 4.20E-295 | – | |
| MobiDBLite | 23 | 42 | 20 | – | – | |
| Phobius | 115 | 134 | 20 | – | – | |
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 135 | 920 | 786 | – | – | |
| MobiDBLite | 331 | 364 | 34 | – | – | |
| Gene3D | 504 | 724 | 221 | 1.90E-34 | ||
| SUPERFAMILY | 506 | 721 | 216 | 9.01E-23 | ||
| SMART | 527 | 560 | 34 | 18 | ||
| ProSiteProfiles | 527 | 560 | 34 | 6.107 | ||
| SMART | 589 | 622 | 34 | 44 | ||
| ProSiteProfiles | 589 | 724 | 136 | 22.836 | ||
| ProSiteProfiles | 623 | 656 | 34 | 12.715 | ||
| SMART | 623 | 656 | 34 | 1.30E-04 | ||
| Pfam | 624 | 656 | 33 | 3.60E-05 | ||
| ProSiteProfiles | 657 | 690 | 34 | 7.257 | ||
| SMART | 657 | 690 | 34 | 0.0081 | ||
| Pfam | 658 | 689 | 32 | 0.002 | ||
| ProSiteProfiles | 691 | 724 | 34 | 5.458 | ||
| PANTHER | 759 | 916 | 158 | 4.20E-295 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1385260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1385260.1, powered by CORGI.
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