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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1548700 |
| Transcript ID | Lj1g3v1548700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: BEACH domain-containing protein lvsC-like [Cicer arietinum] gi|502133135|ref|XP_004501660.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1672 | 1672 | – | – | |
| PANTHER | 1 | 736 | 736 | 0 | – | |
| PANTHER | 1 | 736 | 736 | 0 | – | |
| SUPERFAMILY | 72 | 263 | 192 | 4.40E-20 | ||
| Gene3D | 77 | 264 | 188 | 4.50E-13 | ||
| Pfam | 83 | 254 | 172 | 3.40E-08 | – | |
| Pfam | 325 | 604 | 280 | 6.90E-78 | ||
| SUPERFAMILY | 549 | 651 | 103 | 4.61E-05 | ||
| SUPERFAMILY | 730 | 776 | 47 | 4.61E-05 | ||
| PANTHER | 771 | 1300 | 530 | 0 | – | |
| PANTHER | 771 | 1300 | 530 | 0 | – | |
| Pfam | 1198 | 1293 | 96 | 4.50E-12 | – | |
| PANTHER | 1333 | 1427 | 95 | 0 | – | |
| PANTHER | 1333 | 1427 | 95 | 0 | – | |
| MobiDBLite | 1348 | 1393 | 46 | – | – | |
| Gene3D | 1397 | 1438 | 42 | 6.20E-20 | ||
| SUPERFAMILY | 1397 | 1439 | 43 | 7.38E-19 | ||
| CDD | 1398 | 1553 | 156 | 1.94E-18 | – | |
| PANTHER | 1483 | 2242 | 760 | 0 | – | |
| PANTHER | 1483 | 2242 | 760 | 0 | – | |
| Gene3D | 1487 | 1546 | 60 | 6.20E-20 | ||
| SUPERFAMILY | 1488 | 1551 | 64 | 7.38E-19 | ||
| Pfam | 1494 | 1549 | 56 | 7.40E-12 | ||
| ProSiteProfiles | 1574 | 1864 | 291 | 120.36 | ||
| SUPERFAMILY | 1581 | 1864 | 284 | 1.83E-123 | ||
| Gene3D | 1583 | 1864 | 282 | 5.60E-132 | ||
| SMART | 1586 | 1864 | 279 | 1.30E-197 | ||
| Pfam | 1588 | 1864 | 277 | 8.00E-125 | ||
| CDD | 1589 | 1864 | 276 | 2.71E-145 | ||
| Phobius | 1673 | 1690 | 18 | – | – | |
| Phobius | 1691 | 2244 | 554 | – | – | |
| SUPERFAMILY | 1971 | 2233 | 263 | 1.25E-40 | ||
| Gene3D | 1974 | 2227 | 254 | 2.50E-44 | ||
| SMART | 1997 | 2036 | 40 | 1.20E-06 | ||
| Pfam | 2000 | 2035 | 36 | 2.10E-05 | ||
| ProSiteProfiles | 2004 | 2234 | 231 | 14.397 | ||
| ProSiteProfiles | 2004 | 2045 | 42 | 13.616 | ||
| ProSitePatterns | 2023 | 2037 | 15 | – | ||
| SMART | 2062 | 2101 | 40 | 0.0081 | ||
| Pfam | 2065 | 2098 | 34 | 0.013 | ||
| SMART | 2104 | 2144 | 41 | 1.2 | ||
| SMART | 2146 | 2184 | 39 | 23 | ||
| SMART | 2187 | 2225 | 39 | 1.4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1548700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1548700.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.