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Lj1g3v1787470.1

Overview

Field Value
Gene ID Lj1g3v1787470
Transcript ID Lj1g3v1787470.1
Lotus japonicus genome version MG20 v3.0
Description protease FtsH-like protein 4 [Brachypodium distachyon] gi|255316772|gb|ACU01771.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23076
1 238 238 8.60E-137 –
PANTHER
PTHR23076:SF73
1 238 238 8.60E-137 –
Gene3D
G3DSA:3.40.50.300
16 179 164 1.70E-47
IPR027417
SUPERFAMILY
SSF52540
20 240 221 2.15E-51
IPR027417
CDD
cd00009
22 171 150 1.31E-14 –
SMART
SM00382
51 173 123 1.40E-14
IPR003593
Pfam
PF00004
56 170 115 1.50E-30
IPR003959
ProSitePatterns
PS00674
141 159 19 –
IPR003960
Gene3D
G3DSA:1.10.8.60
180 241 62 3.00E-16 –
MobiDBLite
mobidb-lite
295 316 22 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj1g3v1787470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1787470.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.