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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1931430 |
| Transcript ID | Lj1g3v1931430.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 322 | 322 | – | – | |
| MobiDBLite | 1 | 51 | 51 | – | – | |
| PANTHER | 7 | 176 | 170 | 7.60E-176 | – | |
| PANTHER | 7 | 176 | 170 | 7.60E-176 | – | |
| Pfam | 8 | 26 | 19 | 2.40E-05 | ||
| Gene3D | 54 | 183 | 130 | 8.90E-46 | – | |
| SUPERFAMILY | 54 | 177 | 124 | 8.24E-44 | ||
| MobiDBLite | 173 | 240 | 68 | – | – | |
| PANTHER | 201 | 344 | 144 | 7.60E-176 | – | |
| PANTHER | 201 | 344 | 144 | 7.60E-176 | – | |
| SUPERFAMILY | 222 | 307 | 86 | 8.24E-44 | ||
| Gene3D | 222 | 308 | 87 | 8.90E-46 | – | |
| SMART | 247 | 314 | 68 | 2.00E-15 | ||
| ProSiteProfiles | 252 | 314 | 63 | 17.281 | ||
| CDD | 255 | 333 | 79 | 4.20E-41 | – | |
| ProSitePatterns | 258 | 297 | 40 | – | ||
| Pfam | 289 | 340 | 52 | 3.10E-15 | ||
| TMHMM | 321 | 343 | 23 | – | – | |
| Phobius | 323 | 343 | 21 | – | – | |
| Phobius | 344 | 344 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | SNAP receptor activity | Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj1g3v1931430.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1931430.2, powered by CORGI.
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