Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PS00914

Source: ProSitePatterns

Description

Syntaxin / epimorphin family signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005484
Molecular function SNAP receptor activity Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
Subterm of
GO:0006886
Biological process Intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Subterm of
Part of
GO:0016020
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Subterm of

Associated Lotus transcripts 30

Transcript Name Description Predicted domains Domain count
Lj0g3v0060129.1
– PREDICTED: syntaxin-43-like [Glycine max] gi|356576833|ref|XP_003556534.1|
Domains
20
Lj0g3v0109489.1
– PREDICTED: syntaxin-related protein KNOLLE-like [Glycine max] gi|356559528|ref|XP_003548051.1|
Domains
18
Lj0g3v0163669.1
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
15
Lj1g3v1931430.1
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
Lj1g3v1931430.2
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
Lj1g3v1931430.3
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
Lj1g3v4863130.1
– PREDICTED: syntaxin-43-like [Cicer arietinum] gi|502112650|ref|XP_004494399.1|
Domains
20
Lj4g3v1107690.1
– PREDICTED: syntaxin-22-like [Glycine max] gi|356496277|ref|XP_003516995.1|
Domains
21
Lj5g3v0626690.1
– SNARE protein [Lotus japonicus] gi|407969114|dbj|BAM62426.1|
Domains
17
Lj5g3v0841020.1
– Syntaxin-121 [Medicago truncatula] gi|357440101|ref|XP_003590328.1|
Domains
22
Lj6g3v0872240.1
– PREDICTED: syntaxin-61-like [Glycine max] gi|356553080|ref|XP_003544886.1|
Domains
17
Lj6g3v2080290.1
– PREDICTED: syntaxin-124-like [Cicer arietinum] gi|502077674|ref|XP_004485712.1|
Domains
21
LotjaGi1g1v0079300.1
– Syntaxin, putative; TAIR: AT5G05760.1 syntaxin of plants 31; Swiss-Prot: sp|Q9FFK1|SYP31_ARATH Syntaxin-31; TrEMBL-Plants: tr|A0A151S1L4|A0A151S1L4_CAJCA Syntaxin-31; Found in the gene: LotjaGi1g1v0079300
Domains
19
LotjaGi1g1v0390200.1
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.2
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.3
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|A0A0B2Q4J0|A0A0B2Q4J0_GLYSO Syntaxin-32; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.4
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0761800.1
– Syntaxin, putative; TAIR: AT3G05710.2 syntaxin of plants 43; Swiss-Prot: sp|Q9SUJ1|SYP43_ARATH Syntaxin-43; TrEMBL-Plants: tr|C6TBP9|C6TBP9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0761800
Domains
21
LotjaGi2g1v0104900.1
– Syntaxin, putative; TAIR: AT1G08560.1 syntaxin of plants 111; Swiss-Prot: sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE; TrEMBL-Plants: tr|V7C3E5|V7C3E5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0104900
Domains
22
LotjaGi2g1v0104900.2
– Syntaxin, putative; TAIR: AT1G08560.1 syntaxin of plants 111; Swiss-Prot: sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE; TrEMBL-Plants: tr|V7C3E5|V7C3E5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0104900
Domains
22
LotjaGi2g1v0335500.1
– Syntaxin; TAIR: AT5G46860.1 Syntaxin/t-SNARE family protein; Swiss-Prot: sp|P93654|SYP22_ARATH Syntaxin-22; TrEMBL-Plants: tr|I1J4T0|I1J4T0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0335500
Domains
19
LotjaGi3g1v0159300.1
– Syntaxin, putative; TAIR: AT3G09740.1 syntaxin of plants 71; Swiss-Prot: sp|Q9SF29|SYP71_ARATH Syntaxin-71; TrEMBL-Plants: tr|I3T7B5|I3T7B5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0159300
Domains
15
LotjaGi4g1v0050100.1
– Syntaxin, putative; TAIR: AT1G61290.1 syntaxin of plants 124; Swiss-Prot: sp|O64791|SY124_ARATH Syntaxin-124; TrEMBL-Plants: tr|G7ILD5|G7ILD5_MEDTR Syntaxin of plants 122 protein; Found in the gene: LotjaGi4g1v0050100
Domains
22
LotjaGi4g1v0169100.1
– Syntaxin; TAIR: AT5G46860.1 Syntaxin/t-SNARE family protein; Swiss-Prot: sp|P93654|SYP22_ARATH Syntaxin-22; TrEMBL-Plants: tr|I3SK89|I3SK89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0169100
Domains
21
LotjaGi5g1v0076900.1
– Syntaxin, putative; TAIR: AT3G09740.1 syntaxin of plants 71; Swiss-Prot: sp|Q9SF29|SYP71_ARATH Syntaxin-71; TrEMBL-Plants: tr|K0J6E7|K0J6E7_LOTJA SNARE protein; Found in the gene: LotjaGi5g1v0076900
Domains
17
LotjaGi5g1v0106400.1
– Syntaxin, putative; TAIR: AT3G11820.1 syntaxin of plants 121; Swiss-Prot: sp|Q9ZSD4|SY121_ARATH Syntaxin-121; TrEMBL-Plants: tr|B7FI20|B7FI20_MEDTR Syntaxin of plants 122 protein; Found in the gene: LotjaGi5g1v0106400
Domains
23
LotjaGi5g1v0228300.1
– Syntaxin, putative; TAIR: AT3G05710.2 syntaxin of plants 43; Swiss-Prot: sp|Q9SUJ1|SYP43_ARATH Syntaxin-43; TrEMBL-Plants: tr|A0A151U526|A0A151U526_CAJCA Syntaxin-43; Found in the gene: LotjaGi5g1v0228300
Domains
21
LotjaGi5g1v0228300.2
– Syntaxin, putative; TAIR: AT3G05710.2 syntaxin of plants 43; Swiss-Prot: sp|Q9SUJ1|SYP43_ARATH Syntaxin-43; TrEMBL-Plants: tr|A0A151U526|A0A151U526_CAJCA Syntaxin-43; Found in the gene: LotjaGi5g1v0228300
Domains
21
LotjaGi5g1v0228300.3
– Syntaxin, putative; TAIR: AT3G05710.1 syntaxin of plants 43; Swiss-Prot: sp|Q9SUJ1|SYP43_ARATH Syntaxin-43; TrEMBL-Plants: tr|A0A0L9TY73|A0A0L9TY73_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228300
Domains
16
LotjaGi6g1v0338200.1
– Syntaxin, putative; TAIR: AT1G61290.1 syntaxin of plants 124; Swiss-Prot: sp|O64791|SY124_ARATH Syntaxin-124; TrEMBL-Plants: tr|G7ILD5|G7ILD5_MEDTR Syntaxin of plants 122 protein; Found in the gene: LotjaGi6g1v0338200
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd15848 CDD 1 3.33