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IPR021538

Source: InterPro

Description

IPR021538 is a Syntaxin-5, N-terminal, Sly1p-binding domain.

<p>This entry represents the Sed5 N-terminal and the N terminus of Syntaxin-5-like proteins. It is the region of Syntaxin that interacts with Sly1p, a positive regulator of intracellular membrane fusion, allowing SM (cytosolic Sec1/munc18-like) proteins to stay associated with the assembling fusion machinery. This allows the SM proteins to participate in late fusion steps [[cite:PUB00027426]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript Name Description Predicted domains Domain count
Lj0g3v0163679.2
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
8
Lj1g3v1931430.1
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
Lj1g3v1931430.2
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
Lj1g3v1931430.3
– PREDICTED: syntaxin-32-like [Glycine max] gi|356515506|ref|XP_003526441.1|
Domains
19
LotjaGi1g1v0079300.1
– Syntaxin, putative; TAIR: AT5G05760.1 syntaxin of plants 31; Swiss-Prot: sp|Q9FFK1|SYP31_ARATH Syntaxin-31; TrEMBL-Plants: tr|A0A151S1L4|A0A151S1L4_CAJCA Syntaxin-31; Found in the gene: LotjaGi1g1v0079300
Domains
19
LotjaGi1g1v0079300.2
– Syntaxin, putative; TAIR: AT5G05760.1 syntaxin of plants 31; Swiss-Prot: sp|Q9FFK1|SYP31_ARATH Syntaxin-31; TrEMBL-Plants: tr|V7BA95|V7BA95_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079300
Domains
10
LotjaGi1g1v0390200.1
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.2
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.3
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|A0A0B2Q4J0|A0A0B2Q4J0_GLYSO Syntaxin-32; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.4
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I3SC69|I3SC69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
19
LotjaGi1g1v0390200.5
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|A0A0B2Q4J0|A0A0B2Q4J0_GLYSO Syntaxin-32; Found in the gene: LotjaGi1g1v0390200
Domains
17
LotjaGi1g1v0390200.6
– Syntaxin, putative; TAIR: AT3G24350.1 syntaxin of plants 32; Swiss-Prot: sp|Q9LK09|SYP32_ARATH Syntaxin-32; TrEMBL-Plants: tr|I1K912|I1K912_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0390200
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 8.33