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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2822810 |
| Transcript ID | Lj1g3v2822810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Glycine max] gi|356513749|ref|XP_003525573.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 156 | 146 | 1.50E-146 | – | |
| PANTHER | 11 | 156 | 146 | 1.50E-146 | – | |
| Pfam | 18 | 49 | 32 | 2.00E-06 | ||
| ProSiteProfiles | 22 | 56 | 35 | 10.567 | ||
| SUPERFAMILY | 23 | 93 | 71 | 6.45E-05 | ||
| TIGRFAM | 24 | 57 | 34 | 3.60E-06 | ||
| Pfam | 57 | 105 | 49 | 7.90E-15 | ||
| ProSiteProfiles | 57 | 91 | 35 | 12.595 | ||
| TIGRFAM | 61 | 93 | 33 | 1.80E-10 | ||
| ProSiteProfiles | 92 | 126 | 35 | 10.95 | ||
| TIGRFAM | 94 | 128 | 35 | 5.40E-04 | ||
| Pfam | 122 | 152 | 31 | 1.20E-05 | ||
| ProSiteProfiles | 127 | 161 | 35 | 8.703 | ||
| SUPERFAMILY | 128 | 167 | 40 | 6.45E-05 | ||
| ProSiteProfiles | 182 | 216 | 35 | 5.229 | ||
| Pfam | 192 | 213 | 22 | 0.072 | ||
| ProSiteProfiles | 217 | 251 | 35 | 8.243 | ||
| Gene3D | 221 | 417 | 197 | 1.70E-06 | ||
| SUPERFAMILY | 224 | 318 | 95 | 6.45E-05 | ||
| Pfam | 224 | 265 | 42 | 3.30E-07 | ||
| PANTHER | 247 | 434 | 188 | 1.50E-146 | – | |
| PANTHER | 247 | 434 | 188 | 1.50E-146 | – | |
| ProSiteProfiles | 252 | 286 | 35 | 10.095 | ||
| TIGRFAM | 254 | 288 | 35 | 1.50E-06 | ||
| Pfam | 286 | 332 | 47 | 3.80E-20 | ||
| ProSiteProfiles | 287 | 321 | 35 | 14.984 | ||
| TIGRFAM | 289 | 323 | 35 | 3.50E-13 | ||
| ProSiteProfiles | 322 | 357 | 36 | 6.665 | ||
| Pfam | 358 | 401 | 44 | 2.10E-14 | ||
| ProSiteProfiles | 358 | 392 | 35 | 12.803 | ||
| TIGRFAM | 360 | 393 | 34 | 2.10E-09 | ||
| SUPERFAMILY | 362 | 419 | 58 | 6.45E-05 | ||
| ProSiteProfiles | 393 | 427 | 35 | 12.299 | ||
| TIGRFAM | 395 | 428 | 34 | 3.50E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2822810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2822810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.