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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3329860 |
| Transcript ID | Lj1g3v3329860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Cicer arietinum] gi|502181646|ref|XP_004516854.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 627 | 627 | 0 | ||
| PANTHER | 1 | 627 | 627 | 0 | – | |
| Gene3D | 34 | 253 | 220 | 1.00E-06 | ||
| SUPERFAMILY | 35 | 258 | 224 | 5.86E-10 | ||
| Gene3D | 354 | 400 | 47 | 7.40E-04 | ||
| ProSiteProfiles | 402 | 553 | 152 | 27.699 | ||
| Pfam | 410 | 532 | 123 | 3.90E-13 | ||
| Gene3D | 490 | 521 | 32 | 7.40E-04 | ||
| ProSiteProfiles | 560 | 776 | 217 | 15.489 | ||
| Gene3D | 599 | 629 | 31 | 7.40E-04 | ||
| PANTHER | 664 | 947 | 284 | 0 | ||
| PANTHER | 664 | 947 | 284 | 0 | – | |
| Gene3D | 724 | 747 | 24 | 7.40E-04 | ||
| Coils | 819 | 853 | 35 | – | – | |
| Gene3D | 853 | 910 | 58 | 1.80E-04 | ||
| SUPERFAMILY | 861 | 902 | 42 | 7.07E-05 | – | |
| CDD | 861 | 897 | 37 | 0.00204174 | – | |
| ProSiteProfiles | 862 | 897 | 36 | 9.288 | ||
| Pfam | 902 | 944 | 43 | 1.80E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj1g3v3329860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3329860.1, powered by CORGI.
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