Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v3404520.2

Overview

Field Value
Gene ID Lj1g3v3404520
Transcript ID Lj1g3v3404520.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphatidylinositol 4-kinase alpha-like isoform 1 [Glycine max] gi|356508450|ref|XP_003522970.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 22 22 – –
PANTHER
PTHR10048:SF15
36 630 595 1.40E-267 –
PANTHER
PTHR10048
36 630 595 1.40E-267
IPR015433
SUPERFAMILY
SSF48371
78 240 163 1.84E-39
IPR016024
Gene3D
G3DSA:1.25.40.70
85 240 156 3.30E-24
IPR001263
ProSiteProfiles
PS51545
86 263 178 15.641
IPR001263
SMART
SM00145
88 273 186 2.50E-06
IPR001263
Pfam
PF00613
126 240 115 8.10E-21
IPR001263
Gene3D
G3DSA:3.30.1010.10
276 416 141 9.00E-38 –
SUPERFAMILY
SSF56112
277 624 348 2.86E-79
IPR011009
CDD
cd05167
331 630 300 0 –
ProSiteProfiles
PS50290
370 612 243 53.431
IPR000403
SMART
SM00146
371 628 258 1.80E-70
IPR000403
Pfam
PF00454
371 430 60 4.60E-08
IPR000403
ProSitePatterns
PS00915
374 388 15 –
IPR018936
Gene3D
G3DSA:1.10.1070.11
417 617 201 1.10E-57
IPR000403
Pfam
PF00454
431 578 148 9.60E-19
IPR000403

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0046854
Biological process Phosphatidylinositol phosphorylation The process of introducing one or more phosphate groups into a phosphatidylinositol, any glycerophosphoinositol having one phosphatidyl group esterified to one of the hydroxy groups of inositol.
Subterm of
GO:0048015
Biological process Phosphatidylinositol-mediated signaling A series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v3404520.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3404520.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.