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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4093240 |
| Transcript ID | Lj1g3v4093240.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cell division cycle protein 48 homolog AF_1297-like [Glycine max] gi|356503365|ref|XP_003520480.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | – | – | |
| PANTHER | 42 | 102 | 61 | 0 | – | |
| PANTHER | 42 | 102 | 61 | 0 | – | |
| PANTHER | 140 | 402 | 263 | 0 | – | |
| PANTHER | 140 | 402 | 263 | 0 | – | |
| SUPERFAMILY | 416 | 641 | 226 | 6.87E-55 | ||
| Gene3D | 416 | 592 | 177 | 8.00E-52 | ||
| PANTHER | 419 | 638 | 220 | 0 | – | |
| PANTHER | 419 | 638 | 220 | 0 | – | |
| CDD | 446 | 581 | 136 | 1.01E-25 | – | |
| SMART | 448 | 584 | 137 | 2.70E-17 | ||
| Pfam | 452 | 581 | 130 | 3.70E-40 | ||
| Gene3D | 593 | 639 | 47 | 3.90E-19 | – | |
| PANTHER | 693 | 1010 | 318 | 0 | – | |
| PANTHER | 693 | 1010 | 318 | 0 | – | |
| Gene3D | 709 | 731 | 23 | 3.90E-19 | – | |
| Gene3D | 736 | 921 | 186 | 4.90E-64 | ||
| SUPERFAMILY | 738 | 987 | 250 | 1.31E-67 | ||
| CDD | 746 | 912 | 167 | 8.43E-28 | – | |
| SMART | 776 | 914 | 139 | 1.70E-19 | ||
| Pfam | 780 | 911 | 132 | 1.20E-42 | ||
| ProSitePatterns | 882 | 900 | 19 | – | ||
| Gene3D | 922 | 988 | 67 | 1.80E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj1g3v4093240.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4093240.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.