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Lj1g3v4317520.1

Overview

Field Value
Gene ID Lj1g3v4317520
Transcript ID Lj1g3v4317520.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription repressor KAN1-like isoform X1 [Cicer arietinum] gi|502109125|ref|XP_004493572.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31314
1 358 358 2.70E-139 –
PANTHER
PTHR31314:SF7
1 358 358 2.70E-139 –
ProSiteProfiles
PS51294
184 244 61 11.082
IPR017930
SUPERFAMILY
SSF46689
185 241 57 3.58E-17
IPR009057
TIGRFAM
TIGR01557
187 242 56 2.40E-23
IPR006447
Gene3D
G3DSA:1.10.10.60
187 242 56 3.60E-28
IPR009057
Pfam
PF00249
191 240 50 1.60E-09
IPR001005
Pfam
PF14379
272 318 47 5.10E-19
IPR025756
Coils
Coil
274 294 21 – –
MobiDBLite
mobidb-lite
339 361 23 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v4317520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4317520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.