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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4528380 |
| Transcript ID | Lj1g3v4528380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Subtilisin-like protease [Medicago truncatula] gi|357510203|ref|XP_003625390.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 7 | 17 | 11 | – | – | |
| PANTHER | 7 | 764 | 758 | 0 | – | |
| PANTHER | 7 | 764 | 758 | 0 | ||
| Phobius | 18 | 21 | 4 | – | – | |
| Phobius | 22 | 767 | 746 | – | – | |
| Pfam | 26 | 106 | 81 | 7.70E-16 | ||
| Gene3D | 26 | 95 | 70 | 8.40E-09 | ||
| SUPERFAMILY | 44 | 106 | 63 | 4.34E-06 | ||
| Gene3D | 96 | 336 | 241 | 3.00E-82 | ||
| CDD | 104 | 577 | 474 | 2.12E-146 | – | |
| SUPERFAMILY | 113 | 167 | 55 | 5.37E-80 | ||
| Pfam | 131 | 588 | 458 | 7.00E-50 | ||
| PRINTS | 131 | 150 | 20 | 6.20E-16 | ||
| SUPERFAMILY | 204 | 340 | 137 | 5.37E-80 | ||
| PRINTS | 207 | 220 | 14 | 6.20E-16 | ||
| CDD | 343 | 472 | 130 | 1.63E-33 | – | |
| SUPERFAMILY | 343 | 436 | 94 | 4.84E-05 | – | |
| Gene3D | 371 | 438 | 68 | 1.00E-04 | – | |
| Pfam | 383 | 454 | 72 | 9.00E-09 | ||
| Gene3D | 481 | 613 | 133 | 3.00E-82 | ||
| SUPERFAMILY | 488 | 614 | 127 | 5.37E-80 | ||
| PRINTS | 540 | 556 | 17 | 6.20E-16 | ||
| ProSitePatterns | 541 | 551 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj1g3v4528380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4528380.1, powered by CORGI.
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