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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4578700 |
| Transcript ID | Lj1g3v4578700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ABC transporter G family member [Medicago truncatula] gi|357510475|ref|XP_003625526.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 481 | 481 | – | – | |
| PANTHER | 23 | 80 | 58 | 0 | – | |
| PANTHER | 23 | 80 | 58 | 0 | – | |
| MobiDBLite | 62 | 81 | 20 | – | – | |
| PANTHER | 97 | 121 | 25 | 0 | – | |
| PANTHER | 97 | 121 | 25 | 0 | – | |
| ProSiteProfiles | 131 | 372 | 242 | 17.594 | ||
| PANTHER | 137 | 684 | 548 | 0 | – | |
| PANTHER | 137 | 684 | 548 | 0 | – | |
| Gene3D | 141 | 360 | 220 | 1.70E-47 | ||
| SUPERFAMILY | 142 | 365 | 224 | 1.96E-43 | ||
| Pfam | 148 | 300 | 153 | 2.20E-23 | ||
| SMART | 157 | 372 | 216 | 3.90E-10 | ||
| ProSitePatterns | 272 | 286 | 15 | – | ||
| Pfam | 466 | 672 | 207 | 1.50E-38 | ||
| TMHMM | 482 | 501 | 20 | – | – | |
| Phobius | 482 | 503 | 22 | – | – | |
| Phobius | 504 | 514 | 11 | – | – | |
| TMHMM | 514 | 536 | 23 | – | – | |
| Phobius | 515 | 536 | 22 | – | – | |
| Phobius | 537 | 556 | 20 | – | – | |
| TMHMM | 556 | 578 | 23 | – | – | |
| Phobius | 557 | 580 | 24 | – | – | |
| Phobius | 581 | 591 | 11 | – | – | |
| TMHMM | 583 | 605 | 23 | – | – | |
| Phobius | 592 | 613 | 22 | – | – | |
| Phobius | 614 | 619 | 6 | – | – | |
| Phobius | 620 | 642 | 23 | – | – | |
| TMHMM | 620 | 642 | 23 | – | – | |
| Phobius | 643 | 741 | 99 | – | – | |
| PANTHER | 708 | 769 | 62 | 0 | – | |
| PANTHER | 708 | 769 | 62 | 0 | – | |
| TMHMM | 739 | 761 | 23 | – | – | |
| Phobius | 742 | 763 | 22 | – | – | |
| Phobius | 764 | 769 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj1g3v4578700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4578700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.