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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4667840 |
| Transcript ID | Lj1g3v4667840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| PANTHER | 9 | 785 | 777 | 0 | ||
| PANTHER | 9 | 785 | 777 | 0 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 14 | 27 | 14 | – | – | |
| Phobius | 28 | 31 | 4 | – | – | |
| Gene3D | 31 | 111 | 81 | 8.80E-04 | ||
| Phobius | 32 | 785 | 754 | – | – | |
| Pfam | 37 | 126 | 90 | 7.30E-19 | ||
| Gene3D | 112 | 172 | 61 | 9.70E-86 | ||
| CDD | 123 | 600 | 478 | 3.77E-149 | – | |
| SUPERFAMILY | 125 | 397 | 273 | 4.06E-84 | ||
| PRINTS | 151 | 170 | 20 | 5.80E-14 | ||
| Pfam | 152 | 604 | 453 | 7.30E-47 | ||
| Gene3D | 205 | 358 | 154 | 9.70E-86 | ||
| MobiDBLite | 219 | 241 | 23 | – | – | |
| PRINTS | 229 | 242 | 14 | 5.80E-14 | ||
| CDD | 366 | 495 | 130 | 9.29E-38 | – | |
| Gene3D | 387 | 495 | 109 | 8.00E-07 | – | |
| Pfam | 391 | 481 | 91 | 1.10E-10 | ||
| Gene3D | 507 | 637 | 131 | 9.70E-86 | ||
| SUPERFAMILY | 510 | 637 | 128 | 4.06E-84 | ||
| PRINTS | 563 | 579 | 17 | 5.80E-14 | ||
| ProSitePatterns | 564 | 574 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj1g3v4667840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4667840.1, powered by CORGI.
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