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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4667850 |
| Transcript ID | Lj1g3v4667850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| PANTHER | 9 | 551 | 543 | 0 | – | |
| PANTHER | 9 | 551 | 543 | 0 | ||
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 14 | 27 | 14 | – | – | |
| Phobius | 28 | 31 | 4 | – | – | |
| Gene3D | 31 | 111 | 81 | 5.20E-04 | ||
| Phobius | 32 | 551 | 520 | – | – | |
| Pfam | 37 | 126 | 90 | 4.40E-19 | ||
| Gene3D | 112 | 172 | 61 | 5.10E-68 | ||
| CDD | 123 | 532 | 410 | 8.24E-147 | – | |
| SUPERFAMILY | 125 | 397 | 273 | 1.57E-68 | ||
| PRINTS | 151 | 170 | 20 | 2.20E-14 | ||
| Pfam | 152 | 536 | 385 | 1.80E-37 | ||
| Gene3D | 205 | 400 | 196 | 5.10E-68 | ||
| MobiDBLite | 219 | 241 | 23 | – | – | |
| PRINTS | 229 | 242 | 14 | 2.20E-14 | ||
| CDD | 366 | 478 | 113 | 7.32E-34 | – | |
| Pfam | 391 | 478 | 88 | 7.30E-10 | ||
| SUPERFAMILY | 391 | 459 | 69 | 9.68E-05 | – | |
| Gene3D | 401 | 455 | 55 | 2.90E-05 | – | |
| Gene3D | 479 | 537 | 59 | 5.10E-68 | ||
| SUPERFAMILY | 490 | 540 | 51 | 1.57E-68 | ||
| PRINTS | 495 | 511 | 17 | 2.20E-14 | ||
| ProSitePatterns | 496 | 506 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj1g3v4667850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4667850.1, powered by CORGI.
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