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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4790660 |
| Transcript ID | Lj1g3v4790660.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: NHL repeat-containing protein 2-like [Glycine max] gi|356571070|ref|XP_003553704.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 355 | 355 | – | – | |
| SUPERFAMILY | 78 | 292 | 215 | 2.00E-45 | ||
| Gene3D | 79 | 94 | 16 | 3.80E-42 | ||
| PRINTS | 80 | 91 | 12 | 1.70E-08 | ||
| Pfam | 83 | 266 | 184 | 1.50E-25 | ||
| CDD | 168 | 266 | 99 | 3.23E-18 | – | |
| Gene3D | 169 | 290 | 122 | 3.80E-42 | ||
| PRINTS | 178 | 191 | 14 | 1.70E-08 | ||
| PANTHER | 191 | 321 | 131 | 0 | – | |
| PANTHER | 191 | 321 | 131 | 0 | – | |
| TIGRFAM | 209 | 266 | 58 | 2.20E-12 | ||
| PRINTS | 210 | 226 | 17 | 1.70E-08 | ||
| PRINTS | 228 | 248 | 21 | 1.70E-08 | ||
| PANTHER | 346 | 936 | 591 | 0 | – | |
| PANTHER | 346 | 936 | 591 | 0 | – | |
| Phobius | 356 | 376 | 21 | – | – | |
| Phobius | 377 | 1089 | 713 | – | – | |
| Gene3D | 423 | 570 | 148 | 1.30E-38 | ||
| ProSiteProfiles | 424 | 570 | 147 | 10.946 | ||
| SUPERFAMILY | 428 | 566 | 139 | 7.81E-27 | ||
| Pfam | 453 | 547 | 95 | 1.70E-11 | ||
| SUPERFAMILY | 594 | 923 | 330 | 6.02E-40 | – | |
| Gene3D | 599 | 921 | 323 | 4.10E-57 | ||
| ProSiteProfiles | 599 | 631 | 33 | 4.585 | ||
| CDD | 638 | 979 | 342 | 3.00E-175 | – | |
| ProSiteProfiles | 651 | 681 | 31 | 6.846 | ||
| Pfam | 656 | 681 | 26 | 7.30E-06 | ||
| ProSiteProfiles | 707 | 741 | 35 | 5.017 | ||
| ProSiteProfiles | 772 | 803 | 32 | 5.366 | ||
| ProSiteProfiles | 836 | 866 | 31 | 10.691 | ||
| Pfam | 837 | 863 | 27 | 3.90E-04 | ||
| ProSiteProfiles | 890 | 921 | 32 | 4.277 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of Lj1g3v4790660.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4790660.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.