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Lj1g3v4916320.2

Overview

Field Value
Gene ID Lj1g3v4916320
Transcript ID Lj1g3v4916320.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peroxisome biogenesis protein 6-like [Cicer arietinum] gi|502108066|ref|XP_004493380.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23077
1 356 356 2.30E-207 –
PANTHER
PTHR23077:SF9
1 356 356 2.30E-207 –
MobiDBLite
mobidb-lite
15 50 36 – –
Gene3D
G3DSA:3.40.50.300
74 260 187 4.20E-60
IPR027417
SUPERFAMILY
SSF52540
76 354 279 1.50E-57
IPR027417
CDD
cd00009
98 249 152 4.16E-26 –
SMART
SM00382
113 253 141 4.90E-17
IPR003593
Pfam
PF00004
117 249 133 2.10E-45
IPR003959
ProSitePatterns
PS00674
220 238 19 –
IPR003960
Gene3D
G3DSA:1.10.8.60
261 342 82 4.40E-15 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v4916320.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4916320.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.